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11-3979-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3238939 [Map]; Strand: c
      • AT5G10290.1 - [+] show detail - leucine-rich repeat transmembrane protein kinase family protein
        Distance: -220; Region: promoter
      • AT5G10300.1 - [+] show detail - methyl esterase 5
        Distance: -678; Region: promoter
    Flanking Genome Sequence: 11-3979-1 - 5-prime edge 
    CAGTCAGCTG TATTATAGCC TCATTGTCAA TGATGTCGAA AATCATTCCT 
    CAATTTACAC AATGGTTGTC AGGTAAAAAA CAACGAGAGT TGATAAGTAG 
    ATTTAGGAGG GAAAAAAGAA AAAGACAATT TAGTTAGTCT TCTTTTACAT 
    CCACGTAATT AAATAGCACA TCGTTCCAAA CATCATTATC AAAGTTCATT 
    AGTTATTTAG GGAAATTACA AGTTGCACGG AGAAAAAGCA GTTCGTGGAC 
    CAACATTGGA CTTTTCTTTC AGACAAAGGC CATTAGCGAG CGAGAGTGAT 
    AATTGCGAAA TTGCCAAAAA ACGCAAAGTC TACCACTAGA CAAGAAAATC 
    GAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3239055 [Map]; Strand: c
      • AT5G10290.1 - [+] show detail - leucine-rich repeat transmembrane protein kinase family protein
        Distance: -336; Region: promoter
      • AT5G10300.1 - [+] show detail - methyl esterase 5
        Distance: -562; Region: promoter
    Flanking Genome Sequence: 11-3979-1 - 3-prime edge 
    NCTGACTGAA ATGGCCAACT ATACACCACT CACTAAGACG AAATGGCCAN 
    CATAAAAAAA GGAAGCGAAT CTCCCTGTAC AAAGGAAAAG TTAAAAATTG 
    GTACCAAAAG GCAAAGGAAA AGGTTAAAAT GAGTCAATAA AAGAGAGTCA 
    CAGTCACAGT GTTTCACGGC CCATGGGCCG GCTAGACTCA AAGAAGGAAG 
    GGAAGCTGTG AAGATTCTCA GATCAATATG AAGATTAGGT CGGTTAACAC 
    TTAACAGGCA CGTGTTTATC GTGTTCAATT AGTTCCGTTA ATTAAGCCTT 
    TTTTACGTCC ATCTAATCGC GGATGTCAAA ATCTTACATG TGTTGGTCCG 
    TTATTAGATT GAAACTGTGA TGTACTCATA TATTTTTTAA AATGTCCAAA 
    AAAATTAATG TAATTTAGCT AAGTGTGATT ACAGAATT

AT5G10290.1

Model type
Protein coding
Short Description
leucine-rich repeat transmembrane protein kinase family protein
Computational Description
leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G65240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10300.1

Model type
Protein coding
Short Description
methyl esterase 5
Curator Summary
Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.
Computational Description
methyl esterase 5 (MES5); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 1 (TAIR:AT2G23620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR