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11-4047-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3427352 [Map]; Strand: c
      • AT1G10417.1 - [+] show detail - unknown protein; Has 26006 Blast hits to 16906 proteins in 1326 species: Arch...
        Distance: 0; Region: exon1 (CDS)
      • AT1G10419.1 - [+] show detail
        Distance: -679; Region: promoter
    Flanking Genome Sequence: 11-4047-1 - 3-prime edge
    CTTTAAAANG GANGAGGTAT TTTACNGACC GTTACCGACC GTTTTCAACA 
    CAATCCATAG ATGTATAGAA ACCTCTTTCT CCTTACACGC AGATCTCGCA
    CTTCTCCGAT CATTGACTGA AGCTGCAATT TGAATTTTGA CAACTTGAGC
    ATCTCCATTT TTGGTTGGTT TCTTCCTCCG ATTTTGAATT TCGACCGCCA
    GAAAATCTCT TCTTTGTGGA AAAAAAATCA ATGTCAACGA GAGGAAAATT
    AGGTCGTCGG AATTGTCAAA CTAATAGTTT AGTTAACGAC AAAAAAAAAN
    NAAAANTACC CCNGGCCCAG GTTANTTAAA TTNNTTTTNT TNGGNCCCAN
    TAANTAAACT TNTCCTNTNN NTTACCCANN GGAAANCNTA ANTCCANCTT
    NTNGNANCTN TNNNANTTNN TTNCCAGGGG CNAACTNTNT TTTNNTTTNN
    AGCTTTNNNN TTTTNAAAAT ANTTTAANNG GNANNCTTNT NTNTNCAGAA
    AANTTTTGGG CCAAAAATTT TTATNNTNTT NCNNCCCTNC NNAGNTAACC
    TTAANNANGG TNCNTNCNNA ANCNACCCCG AANCCANNTC CCTAAAAAAA
    CATAGGGGTN NTTGGNAGAA NNNNCGGANN ANACCAANNN NGNTCCACCC
    NAATNGTCAA ANNANATTCN TTTNNCCTAN GGGGGGTTTT ANCANNGGNA
    NANNACNNGG NAAAAAGCNA TGGACTTCAA CCCAGNCCGG GGNNNNNAGA
    CAACCCNNCC NCTTNNNNNN CNCCCGATNG CGNNCCNCAN ANNCCGNNNC
    CNNNCN

AT1G10417.1

Model type
Protein coding
Curator Summary
Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens.
Computational Description
unknown protein; Has 26006 Blast hits to 16906 proteins in 1326 species: Archae - 433; Bacteria - 3134; Metazoa - 12646; Fungi - 2033; Plants - 1219; Viruses - 58; Other Eukaryotes - 6483 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G10419.1

Model type
Pseudogene
Curator Summary
Pseudogene of AT1G10419
Link
InterPro Scan - TAIR