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11-4100-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23384333 [Map]; Strand: c
    Flanking Genome Sequence: 11-4100-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAG 
    CATGTGTGAA TGTACGCAAA GGTCGCAGCT TTGTGTTTCA AAACCGAAGC 
    AGAAGGGACC AAATTAAGAG ACTGACTGAT CATCATACAC AGTCGTTTCA 
    TTCCTTTATT CTCATCTTTC TCTTCCTCCC ATTTTCTCAC ACCAAATTTC 
    AGCACCTAAT CCGTTAGTTT AACCATGATC CACAACAATA AACCAAGTTG 
    TTTGATTGGT TTAAACAAGA CACTCTAAAC GCAAATTCAA CCTTCTTTTC 
    CTTTCTTTTT TGGTCAATTG AAACATAAAT GTCTGATAAC CTATGACTGA 
    CTAGTCAAGC TATCCTAATG TTTCTGATTA AATTAAGAAA AGGCAAATAC 
    AAGGATGACT TGATTCCCTC CTTTTTCTCA AGACTCGTTG ATACATACAT 
    CTAAAGTAAT ATTTATGTGT AATAAACAAT GGGATTGGCA AAGATGCGGC 
    CTTATTATTG AAAAGCGACG TCTTTTTTTT TTNTAGNAGT AATCCATTNT 
    TTATGCANCG ACTNTNTNTT ATGTCAANAG TAGTACTACT CACTCCTACT 
    NTNATCGAAA AATAATCANA TTTTTNTTTA AAANAAAANA AAAGGGGAAA 
    TACCTAAACG TNACNTTTGN CTTTCTATTT ATANCCAAAC ANANAAANTT 
    TCCTATTNAA GCTCTGAAAG NCNAANCAAA GTTANTTNNA NNAANNAAAA 
    AGGGGGGGAN NNNAAACTTA AANNACGGAC CCCNTTAAAA GGTTTNGCGG 
    GG

AT3G63300.1

Model type
Protein coding
Short Description
FORKED 1
Curator Summary
Encodes a pleckstrin homology domain- and DUF828-containing protein. Mutants have defects in leaf vascular pattering, with vascular bundles that fail to meet distally in both the cotyledons and leaves. Necessary to the formation of the closed leaf vascular pattern characteristic of dicot leaves in response to auxin. Redundant with FKD2. FKD1 may influence PIN1 localization in an auxin dependent manner. proposed to be a key component of the auxin canalization pathway.
Computational Description
FORKED 1 (FKD1); CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT3G22810.1); Has 742 Blast hits to 348 proteins in 78 species: Archae - 0; Bacteria - 118; Metazoa - 127; Fungi - 51; Plants - 226; Viruses - 0; Other Eukaryotes - 220 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63300.2

Model type
Protein coding
Short Description
FORKED 1
Curator Summary
Encodes a pleckstrin homology domain- and DUF828-containing protein. Mutants have defects in leaf vascular pattering, with vascular bundles that fail to meet distally in both the cotyledons and leaves. Necessary to the formation of the closed leaf vascular pattern characteristic of dicot leaves in response to auxin. Redundant with FKD2. FKD1 may influence PIN1 localization in an auxin dependent manner. proposed to be a key component of the auxin canalization pathway.
Computational Description
FORKED 1 (FKD1); CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT3G22810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR