1. Home
  2. Mutant Lines
  3. 11-4129-1

11-4129-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 110206 [Map]; Strand: c
      • AT4G00240.1 - [+] show detail - phospholipase D beta 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4129-1 - 3-prime edge 
    GCTGCCAGAC AGGATTTTCG CTGTTGCTAA TGACATATGT TCTTCCTATG 
    ACAGCACCAG CGACTGATAT GGACACGTAA GGATCACTAG TGATCTTCTT 
    GCTCAACTGG CCTTCGATCA TATTGGTCAT GCCACCAAAC ACAACACCCA 
    ATGTCTTATG AAACAAATCT AAGTTTGGTA GATTATTAGC ACAAGAAGCC 
    CAAATATCCA AATTACCATG CAACAAGAGG ACCTTCGAGG AGGCTTTACC 
    AAAGGGCACA ATGTGCATNC CGGGACTATG CGGCGATGCG GTATATGTAA 
    AACCATG

AT4G00240.1

Model type
Protein coding
Short Description
phospholipase D beta 2
Curator Summary
member of C2-PLD subfamily
Computational Description
phospholipase D beta 2 (PLDBETA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D, plant (InterPro:IPR011402), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D/Transphosphatidylase (InterPro:IPR001736); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2407 Blast hits to 1935 proteins in 427 species: Archae - 0; Bacteria - 522; Metazoa - 526; Fungi - 534; Plants - 642; Viruses - 3; Other Eukaryotes - 180 (source: NCBI BLink).
Link
InterPro Scan - TAIR