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11-4211-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28892255 [Map]; Strand: c
      • AT1G76920.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-4211-1 - 5-prime edge
    GGTGGAAGAC AGTTTACCGG AGACGATTCC ATGGTTTTTC TCTTCCTTCT 
    CCGTAGGTTT CGGCGGCGGA GAGAAATGGT CTAATCGAGA ATTGTGGGAA
    AACTAAAGGG TAAAATCGGA AAAGTATGAG AATGCGCCAT TGGTATGCGT
    TGTCATTGGT TCCGGTTTTG GGTATCGGAA GGAGAGTGGT GAAGAAAAGG
    GAAATAATAT ATAGTTCCCA TTTTGTCCTT GGGTTGCTTA ATGCGCTGAG
    TCACCTACTT GTCTGCTTAT CATTTGAATA TTTTCATAAT TGACTATTTT
    ATATTCTCTT TGGTCATTAT TTGTATGAAG TTTTGTATTA GAAAGACTCG
    ACATACGCAT TTTTCAAAGA TTCATAATTG TTTAAACCTA CTTAATATCT
    ATATATACAT TTTTACATTC ATTTTGTGAA ATAAGTCATG GAGTTGAGAT
    TTATTTACAA TGGCTGTCAC TGGCATTTAA TAATTGTTTT TGATAATTAG
    AAAGAAAATC TTCTAATTAA ATATTTGATA TTTAACAATC TTCCCAAAAT
    CTTTCTACTT TAACTACACA ATTAATTACT AAAAGAAAAC TTCCAAAATA
    TTTAATATCA TTTAATTACT ACAAAATTAT CGTTTTTGAT ATTGCTTTTC
    GGCATGATTA TAATCATGAA GCCGCATAGA TATTTGATAG CATTTAATTA
    CTACAAAAT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28892319 [Map]; Strand: c
      • AT1G76920.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4211-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGCTTCCACC TGATTCTCTC CACCAGATCT TCTCATCTCT TCCTATTCGT
    GATATCATGA TCTGCAGATC CGTCTGCAAG TTCTTCAACC AGCTTTTGAC
    CTCTCAGTGT TTCATAGAGA TTATCTCAAC TCGTCCGCCG TTGAATCTAC
    TCGCTCTCCG ACCTCCTCAT CACCACCACA GTCACCGTCA CAGCGGAAAC
    GGACACGCAA CGAATATCCG ACCGTACATC CATGTATATG ATCCAGAGCA
    GAATCAATGG TTCAGATTCA ATCTCGATTT CCTCCCTTTC CGATCTCCTC
    AGCCTGTAGC TTCTTCAAGC GGATTGATCT ATCTTTGGGG AGATTCGATT
    GATTTAGCTG AATCTAGCAA ATCGCTCGTC GCTTGTAATC CGTTAACTCG
    GCAGTTCAAG GTTTTGCCTC AGCTTGGCTC AGCTTGGTCA CGCCATGGTA
    CTGTTCTTGT TGATTCGGTG AATCGAGTCA TGGTGCTCAC TGAGCTCGCT
    GCGTTGTATT ACTCAGGTAC TGTAGTTGCT AACCAATGGC TCAAATTCTC
    GTCGAATTTA CCATCGAAAC CTAGAAGTCC TGTGTTAATG TCTAGCTCGG
    TTTTCGCATT GTGTGATGTT GGATCTCCAT GGAGAAGTCA ATGGAAGCT

AT1G76920.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Kelch repeat type 2 (InterPro:IPR011498); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G61590.2); Has 279 Blast hits to 279 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR