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11-4211-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28892255 [Map]; Strand: c
      • AT1G76920.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-4211-1 - 5-prime edge 
    GGTGGAAGAC AGTTTACCGG AGACGATTCC ATGGTTTTTC TCTTCCTTCT 
    CCGTAGGTTT CGGCGGCGGA GAGAAATGGT CTAATCGAGA ATTGTGGGAA 
    AACTAAAGGG TAAAATCGGA AAAGTATGAG AATGCGCCAT TGGTATGCGT 
    TGTCATTGGT TCCGGTTTTG GGTATCGGAA GGAGAGTGGT GAAGAAAAGG 
    GAAATAATAT ATAGTTCCCA TTTTGTCCTT GGGTTGCTTA ATGCGCTGAG 
    TCACCTACTT GTCTGCTTAT CATTTGAATA TTTTCATAAT TGACTATTTT 
    ATATTCTCTT TGGTCATTAT TTGTATGAAG TTTTGTATTA GAAAGACTCG 
    ACATACGCAT TTTTCAAAGA TTCATAATTG TTTAAACCTA CTTAATATCT 
    ATATATACAT TTTTACATTC ATTTTGTGAA ATAAGTCATG GAGTTGAGAT 
    TTATTTACAA TGGCTGTCAC TGGCATTTAA TAATTGTTTT TGATAATTAG 
    AAAGAAAATC TTCTAATTAA ATATTTGATA TTTAACAATC TTCCCAAAAT 
    CTTTCTACTT TAACTACACA ATTAATTACT AAAAGAAAAC TTCCAAAATA 
    TTTAATATCA TTTAATTACT ACAAAATTAT CGTTTTTGAT ATTGCTTTTC 
    GGCATGATTA TAATCATGAA GCCGCATAGA TATTTGATAG CATTTAATTA 
    CTACAAAAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28892319 [Map]; Strand: c
      • AT1G76920.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4211-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGCTTCCACC TGATTCTCTC CACCAGATCT TCTCATCTCT TCCTATTCGT 
    GATATCATGA TCTGCAGATC CGTCTGCAAG TTCTTCAACC AGCTTTTGAC 
    CTCTCAGTGT TTCATAGAGA TTATCTCAAC TCGTCCGCCG TTGAATCTAC 
    TCGCTCTCCG ACCTCCTCAT CACCACCACA GTCACCGTCA CAGCGGAAAC 
    GGACACGCAA CGAATATCCG ACCGTACATC CATGTATATG ATCCAGAGCA 
    GAATCAATGG TTCAGATTCA ATCTCGATTT CCTCCCTTTC CGATCTCCTC 
    AGCCTGTAGC TTCTTCAAGC GGATTGATCT ATCTTTGGGG AGATTCGATT 
    GATTTAGCTG AATCTAGCAA ATCGCTCGTC GCTTGTAATC CGTTAACTCG 
    GCAGTTCAAG GTTTTGCCTC AGCTTGGCTC AGCTTGGTCA CGCCATGGTA 
    CTGTTCTTGT TGATTCGGTG AATCGAGTCA TGGTGCTCAC TGAGCTCGCT 
    GCGTTGTATT ACTCAGGTAC TGTAGTTGCT AACCAATGGC TCAAATTCTC 
    GTCGAATTTA CCATCGAAAC CTAGAAGTCC TGTGTTAATG TCTAGCTCGG 
    TTTTCGCATT GTGTGATGTT GGATCTCCAT GGAGAAGTCA ATGGAAGCT

AT1G76920.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Kelch repeat type 2 (InterPro:IPR011498); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G61590.2); Has 279 Blast hits to 279 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR