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11-4311-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1246031 [Map]; Strand: w
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 11-4311-1 - 5-prime edge
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT AGAGTACTCC AATTTTGGTC AAGGTTGCAT
    TCGGTTTGGT TGATGTCCAA TATTAACGTA ACCGAACTTT GGGGCTAAAA
    TGTAAAGCAC AATAAAAGTT GGGGTTTTAC TTTGTAATTT AGATACTCCA
    AATCCGATGA GTACTCCAAT TTTGGTCCAG GTTGCATTCG GTTTGGTTGA
    TGTCCAATAT TAACGTAACC GAACTTTGGG GCTAAAATGT AAAGCACAAT
    AAAAGTTGGG GTTTTACTTG TAATTTAGAT ACTCCAACTG AAAAACAGAG
    TGTTCTGTTC AATAGCACAA GAGAATTGGT GTCTCTAACG AGATCATTGA
    TCATCGCGCA CGTGAAGACT TGGTTTTTTA TTCTCTAATG ATCCCAGGAA
    TTGCGTAATG CATCTGTTCC GTTTCGCCAG ATACAGGGTT TGCGTCANCA
    CCAAATGTTG ATTCTTGGTA AAAAGTATGA ATTTTTGGTT TTGNTNCCAA
    CATNNNATTG NNATNGNGGA AAGNNNNNTN AANCCNGNAA ANNGNNNNAT
    ANCANNCNNA GGAGANGANC NNANAANNNN NNAANNTNAT NA
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1246175 [Map]; Strand: w
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: 116; Region: intergenic
      • AT1G04570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 553; Region: intergenic
    Flanking Genome Sequence: 11-4311-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGGAGTACTC ATCGGATTCG CTCACTTCCG ATCGCTTCAT TATGATTTTT
    TATTGATAAC TTAGATCCAA ATTTTGTAGA TTTGATTTTG TTCAAAAGCA
    AATTGCAAAG AGCGACAAAT AAGAACACAA AGAAACACAT CTCCATTTAA
    CTAATTAACA AAAGAACACA CAAGATTCGT TCGTTTGTCA GATGGATAGG
    AATTACATTA TTACATAACT TGAAAAAACA TAAACTATAA TAAGTACTTC
    TTAACCAAAC GTCAAAACAC AATTAAAAGA CACAGATTTT CATCAGACTG
    CCATGGTAGA TCCAACACCA GCCTTGTGCT CTCCCACAGT GTGTGGTACA
    TGACCATGAC CATGAGCTTG GCCTGTAGCA TAGTCTTGGT CTCTGTAGCC
    AGGACCATAT TTGCTGCTGA GTGAACCGGC ATGGATCAAC ATGAGGTAGA
    GAAGTTGCGT GAACGTCAAA ATGATAATGA AGGCTTCAAT CATCTTCAAT
    CTCCATCCTC TCCATCCTCC TATGTTTATT TGCTTGCATG CCAACCTTTA
    CCAAAATTAA ATTCAATATT ACCATTTACC ATATATATAT AAAGAAGTTA
    ACAAAATATC CAAACCAAGT TTAGTCGNCA AAATTANCAC TTCGTGAGAA
    GTANCTNGTN GGACATCATA AATAGAATAA TTACCCCTGG CAAGANCTGT
    GATGGCCCTG CNACGATG

AT1G04560.1

Model type
Protein coding
Short Description
AWPM-19-like family protein
Computational Description
AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04570.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Biopterin transport-related protein BT1 (InterPro:IPR004324), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G33280.1); Has 816 Blast hits to 814 proteins in 271 species: Archae - 6; Bacteria - 387; Metazoa - 0; Fungi - 18; Plants - 232; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Link
InterPro Scan - TAIR