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11-4340-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1729458 [Map]; Strand: c
      • AT1G05785.1 - [+] show detail - Got1/Sft2-like vescicle transport protein family
        Distance: -791; Region: promoter
      • AT1G05785.2 - [+] show detail - Got1/Sft2-like vescicle transport protein family
        Distance: -841; Region: promoter
    Flanking Genome Sequence: 11-4340-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAC TACGGTAAAG ATTCGTGAGA TGATGACTCA 
    GATAAGACGA CTTCGAGAGG TATCAAATAA GGAAAAGAGT TACGCGTTAC 
    ATCAATTCAA GAACGATTTC AGGTGAATTT CTAAGTCTTT TCTACAATTT 
    TTCTTTTTTT GGTCTATTTT GTTTTGTTTT GTTAGACTAG ATTTTTACAA 
    TACGGTACGA AAACTAACCG GGCTTTGGAT TCTGTTATTT GATTTAGTCA 
    CTTAATCGTC AGTAATTTCA TAAGTTCAAT TTGTTTTCTA ATCGTTATGT 
    AAATTTAGCA TTTTATTTTT TTCGTTTTTA GACTAGATTT ACAAAACGAT 
    ATGAAAACTA ACCGGACTTT GGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1729456 [Map]; Strand: c
      • AT1G05785.1 - [+] show detail - Got1/Sft2-like vescicle transport protein family
        Distance: -793; Region: promoter
      • AT1G05785.2 - [+] show detail - Got1/Sft2-like vescicle transport protein family
        Distance: -843; Region: promoter
    Flanking Genome Sequence: 11-4340-1 - 3-prime edge 
    ATTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTGATAGACC NNCTTTGTNG NTCTNCATAC TCANNCNAAT TCCAAAAATA 
    GCCCTTGTAT GATGACATNA TCCAAANGAG CCGTCGTGTG ACATCNTCAC 
    AAATAATCTC CGACNAAGCC NTTAATTGAT CAGNANTCAG CTTTNCAGTC 
    GTCNTGTCTC GGNCATNTCA CGGAATCTCC ACCGTAGTCC TTTGTTCTCC 
    ATACTCANTC CAAAATNTCN CTTGTGTNTG ATGATANCAT NCAAAAGAGN 
    CGTNGTATGA CATCATCACA AATAATCTCT GAAGAAACCA TANATTTATC 
    GATCGTTGNN ANTTTCCGNC GAGTNCTGTN ATATCTCGGC CACAACGTCA 
    NCACCGNAAC TTGGAATCCC TTACGTNTNA CNATAATNCC AGATTCACCT 
    TCTTTAAACA TCTCCTTGCC CTCTCTAATG ATCGACTTAN TTAAACATGA 
    TCGGAGAAAA AAACTGAAGA GATACNANTA ATTCCCANAG CGATCGAGAA 
    AGAGATTCAT GACGGCTTCN ATCGACATAT ATAATTNGGT CGAGAAGAAN 
    CTCAAGTTTT TAAAANAAGA AGGANCAATT TTAGGGTTNT GCGCTTCNAN 
    GAATGAGANG TNTGATCCTT ANNANNAGAT NANTGGGGTT AATAANGAAA 
    GGNTTATCAT CGGAAAAAAA GGAAATTNNG GNGATTGANC ACGNGGCTTT 
    AAATGANTTA ATCTGATTTG CNCAGGGAAA AAAAAGGAA

AT1G05785.1

Model type
Protein coding
Short Description
Got1/Sft2-like vescicle transport protein family
Computational Description
Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G01430.2); Has 450 Blast hits to 450 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 165; Fungi - 111; Plants - 97; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05785.2

Model type
Protein coding
Short Description
Got1/Sft2-like vescicle transport protein family
Computational Description
Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G01430.2); Has 450 Blast hits to 450 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 165; Fungi - 111; Plants - 97; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).
Link
InterPro Scan - TAIR