Home
Mutant Lines
11-4391-1

11-4391-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 54759 [Map]; Strand: w
  - AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
    Distance: -1310; Region: intergenic
  - AT4G00150.1 - [+] show detail - GRAS family transcription factor
    Distance: 2440; Region: intergenic
Flanking Genome Sequence: 11-4391-1 - 5-prime edge
```
AACTTGAGTA GAGTTTGTTT ATTGAAATAA ATAGACTAAC TAAGAAAATA 
AATGAAGTAC TTGTAAAGTG AGAGGTTGAG GAGCAGATAT GGTGGGCAAG 
CT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 54643 [Map]; Strand: w
- AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -1194; Region: intergenic
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: 2556; Region: intergenic

CTCAAGTTCA TCAAGATTCG TAACAGTGGA ATCCTTTATT AATGTTAGAT 
CATCAAACTC TACACATGTT TATTTCCATC TCTATGCATG CCTTTATATT 
GCTTAAGTTG TATACACGTA CATATACACN TTCACTACTC TTATTATCTA 
GTTCCATATT ACGCTATATA TTTATGAATT TATATACATA GACCATACTC 
ATGTCCTTGA AAATCAGTTA CATGTTTCTT TTGTTCTTAT CTTTAGTCTT 
TTGTGTTTTC TCTTTTGGCC TTTTTTCTTC CTTTATCTAT TTACAAGTCA 
AGTCAGCTTA TTAACAACGC GGTATTTCCA TCCCCACAAA ATCTTCTTAT 
GGCTACTTTT ATATATATAT ACATATCAAA CTATACTGAC GACAAAATAA 
ATAAATTAAG AAAAAAAAAA ANAAAANGGG GGNGNNGGCC NNNCTTTNTT 
TNNCCAANAA CNCNTTTNAN NCCNTTCNNN TGGNNCNCTC NCCTTCCTNG 
ATNNGACCAT NTAAAACNAA GGGGGGAANC TTTNTTNTTT GGNNGGGNTN 
GNNTNCCCAA TNGGGGGGGA CAAAACNATT TNGNTTNAAA NAAANTCCTN 
GAANTTNCCC CCAANAAANC AAGGCANNCT TTAAAAAAAA ANNGGGGGGN 
AACCCNGGNA AATTNNNNNT TTCCAAANCC TTTNNGGNNG GGGNNNNNAA 
NCCCTTGGNA NNAAANNNGG CCNCCCNCNA NNGGNA

AT4G00140.1

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR