1. Home
  2. Mutant Lines
  3. 11-4406-1

11-4406-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage
Phenotype
seed (PO:0009010)
  • low saturation (PATO:0000328)
    (Seed yield::seed color)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5355428 [Map]; Strand: w
      • AT3G15830.1 - [+] show detail - phosphatidic acid phosphatase-related / PAP2-related
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-4406-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTAT 
    TTGAGGATAG TGTCATAAAA GATGTGTTTA CCGTGTTTAA AGCGGCTAAA
    ACGGTGTTAA GATTGGGTGA AGATGCCAAG ATGCTATGCA GATAACGTGT
    GGCCACAAAT CCTAGATCAA ACGGCTGAGA ACTCGCAGGA GTCATCTGGA
    ACGTGTACTC CACAACCGTA AAAAACATAA CTCCGGCCGC GAATAAACAC
    GGTATCCAAT GGTGTCTCGC CACGTAAATT ATGTCATGCA TCGTCCACGT
    CATAAACGAC GCTTTGCTTG TCCATTCTCC TCCTCCACCG TCATCAGTTT
    TCTGAGCAAT ATCTTCCATT TGGCTATTTA TTGGTCCTAT TTGGCGATTG
    TGGTCGTCGA AGATTCCGTC GATGGTGACG CCGTTAGTGT GTTTTCCGTT
    AATAGGATTA GCTTTACGAC GGAGAGGGGC GACGGTTTTG GTTACGGCGT
    CTGACATGAC CGTTAGAATT AACGGAGAGT GACATTTCGG GATTTAGAGA
    GACGGGTTAT ATAAAGAGAT TACATTTCCA AGGAAGCT

AT3G15830.1

Model type
Protein coding
Short Description
phosphatidic acid phosphatase-related / PAP2-related
Computational Description
phosphatidic acid phosphatase-related / PAP2-related; BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G15820.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Link
InterPro Scan - TAIR