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11-4406-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
seed (PO:0009010)
  • low saturation (PATO:0000328)
    (Seed yield::seed color)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5355428 [Map]; Strand: w
      • AT3G15830.1 - [+] show detail - phosphatidic acid phosphatase-related / PAP2-related
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-4406-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTAT 
    TTGAGGATAG TGTCATAAAA GATGTGTTTA CCGTGTTTAA AGCGGCTAAA 
    ACGGTGTTAA GATTGGGTGA AGATGCCAAG ATGCTATGCA GATAACGTGT 
    GGCCACAAAT CCTAGATCAA ACGGCTGAGA ACTCGCAGGA GTCATCTGGA 
    ACGTGTACTC CACAACCGTA AAAAACATAA CTCCGGCCGC GAATAAACAC 
    GGTATCCAAT GGTGTCTCGC CACGTAAATT ATGTCATGCA TCGTCCACGT 
    CATAAACGAC GCTTTGCTTG TCCATTCTCC TCCTCCACCG TCATCAGTTT 
    TCTGAGCAAT ATCTTCCATT TGGCTATTTA TTGGTCCTAT TTGGCGATTG 
    TGGTCGTCGA AGATTCCGTC GATGGTGACG CCGTTAGTGT GTTTTCCGTT 
    AATAGGATTA GCTTTACGAC GGAGAGGGGC GACGGTTTTG GTTACGGCGT 
    CTGACATGAC CGTTAGAATT AACGGAGAGT GACATTTCGG GATTTAGAGA 
    GACGGGTTAT ATAAAGAGAT TACATTTCCA AGGAAGCT

AT3G15830.1

Model type
Protein coding
Short Description
phosphatidic acid phosphatase-related / PAP2-related
Computational Description
phosphatidic acid phosphatase-related / PAP2-related; BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G15820.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Link
InterPro Scan - TAIR