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11-4407-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 60907 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -1621; Region: intergenic
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: -2503; Region: intergenic
    Flanking Genome Sequence: 11-4407-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CACCACGTAA CTTACTTCAC CCTCACGAAG TTANCACACA CGTATATTAT 
    AGTATTNCAN TATACCNAAT ATTATATTAA TATATCATGA AACTNGAAAA 
    TGTGTNGGTG TATTATGTNT GTCNATAAGA AATAATATTA ATACAGTTTC 
    GCGATCATTT CAAGATNNAT AATAATTNNG TATAAGAAAG AAAAGTGNGA 
    GAAGTAGTTG TTAGCAAATC ACATGGGAAC ATATAAACTA ATTGGTCGGA 
    AAAATGAACA TTTTAACTTT GTGNTGTTAT ATAAAGTAAG TTAACTATCA 
    TTAATCATCA AATATTTATG GTACTTAACA AGTATTATAA TATGGGACTA 
    AACNATTACT NTACAAGAAA CTGAACTCTG TGTTTCNTTT GTGCGGNCAT 
    ANTTCGCATA TANNAGATNN ATCCANAATC NGATATTGTT TATACTTNCG 
    GNGGANCTTC CATGGCGGTC TAGGNCNTNN AANNGGTTGG CCAAANAACC 
    NAANNNTTNC TTGTCTAAGG ACCACCCGAN ATGGGCNGGC TNCCTTCTTN 
    GGAANTGGNC CCCATTACAA NTNGCTGTNG CAATGGCCCG CCTANNCTNN 
    NNCTGNGGTN CNNNNNNANN GCTNNCNNNT TNTNGNNATA AANGGGCGAC 
    NNATGGGNAG NNNTNNNTNA ANANGNTNNA NAGGGGGNNG GGNANTCCNG 
    NGGNNNGNAT TAAGAGGGNA CC

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00160.1

Model type
Protein coding
Short Description
F-box/RNI-like/FBD-like domains-containing protein
Computational Description
F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR