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11-4418-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
vascular leaf (PO:0009025)
  • desaturated green (PATO:0001272)
    (Leaves::pale green)
stem (PO:0009047)
  • desaturated green (PATO:0001272)
    (Stems::pale green)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2451755 [Map]; Strand: w
      • AT3G07670.1 - [+] show detail - Rubisco methyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4418-1 - 5-prime edge 
    CTCCCAGCTT ACTCTCCACT TCACAAACTT CGTAATCAAA ACATCACCCT 
    CTCTTTCTCA CCGCTTCCGC TGTCCCGATG CCGTCCCGGA ATCCACTGCT 
    CAGTTTCGGC CGGTGAGACT ACAATACAAT CCATGGAGGA AGCTCCGAAG 
    ATATCATGGG GATGCGAGAT TGATTCACTT GAGAACGCTA CTTCTCTTCA 
    GAACTGGCTC TCTGATTCAG GTCTCCCTCC GCAGAAAATG GCTATTGATA 
    GAGTCGACAT CGGTGAGCGA GGCCTCGTCG CTTCACAGAA TCTCAGAAAA 
    GGAGAGAAAT TGCTCTTCGT TCCTCCTTCT CTCGTCATCA GTGCTGATTC 
    CGTAAGTTTG CACTCCTAAT TTCACTCGGA ATCAAAGAAT CTAATCTTAT 
    ATTCCTTGAT CTCACTTGCA AGCAATCCCT CACCTCTTGT TCAGATCAAT 
    GCAAGGTTAA AGTATCTGGC TTTCATGAAT GTGAATATCT AATATCGGAG 
    ATTGGGTTTT AGGAATGGAC CAACGCANAA GCTGGTGAAG TGATGAAACG 
    TTATGATGTT CCANATTGGC CTTTGCTCGC CNCTATCTTA TAAGTGAAGC 
    ANGTCTTNAN AAAAGCTCAA GATGGNTTAA CTATATNTNA NCTNTTNCCC 
    NANACCTTAC TNNNTTNNAT ACNGGNANNN NNNGNCNTG

AT3G07670.1

Model type
Protein coding
Short Description
Rubisco methyltransferase family protein
Computational Description
Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT5G14260.2); Has 1290 Blast hits to 1288 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 264; Fungi - 357; Plants - 465; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink).
Link
InterPro Scan - TAIR