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11-4456-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 13950576 [Map]; Strand: c
      • AT5G35777.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 11-4456-1 - 5-prime edge
    GGGNTAAACT AACAAAATCC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCAG GACATCGGTT AACGAAACCG TGTCAGACAA
    TGGGAACACT CCCATACTCA AGGCAAATGT GTTACTTCCA TCTGCGAATC
    CCACCGAACA TGGCGAAATA TTTTTGATGT TATGTTATAG AGAAAGGTTT
    CCCGTCATGT GGTGAGAAGC CCCTGTATCA AGTATCACAT TACCAAGAGC
    TCTCTTACCC GACAACTTGT CGACGTTATT GGTGCTTGAT TTTTCGGTGA
    CCATTTGTTG AAGAACCTTT ATTTGTTCCG GTGTAAAGTC AGGAAAAACA
    GAGGAATGTG AGCTTGTGGC ATGAGCTGTA AAAGCT

AT5G35777.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 2.0e-67 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)
Link
InterPro Scan - TAIR