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11-4457-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1213524 [Map]; Strand: w
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-4457-1 - 3-prime edge 
    GCTGATGGAT ACCCACTTAA CATCCATCTC TATGTGGCGC TTTTGCAGTC 
    GATATTTGAC ATACGTGATG AGACCTTGGT TCTTGATGAA ATCGATGAGC 
    TTTTAGAACT GATGAAGAAG ACATGGATAA TGTTGGGGAT CACACNGAGC 
    TATACATAAC TTGTGTTTCA CTTGGGTTCT GTTTCATCAG TACATTGTGA 
    CATCACAGAT GGAGCCAGAC TTGCTTGGTG CCTCTCACGC CATGTTGGCT 
    GAAGTTGCCA ATGACGCCAA GAAGTCTGAT CGCGAGGCTC TTTACGTGAA 
    GCTCTTGACC TCGACATTGG CCTCTATGCA AGGATGGACT GAAAAAAGGT 
    ATTTCTTTTT GCCTTGTAAA TGGACTTGAT CACACAAAAC TGAATCTGAT 
    TGTGAATGTG TGATTATAGG TTGTTGAGCT ATCATGATTA TTTTCAACGA 
    GGGAACGTGG GATTGATCGA GAATCTTCTG CCATTAGCGT TGTCTTCTTC 
    TAAGATCTTG GGGGAGGACG TGACAATCTC TCAAATGAAT GGTCTAGAGA 
    AAGGTGATGT GAAATTGGTG GATTCTTCAG GGGATCGCGT CGATTACTAT 
    ATAAGAGCAT CTATTAAAAA CGCCTTCTCA AAGGTAATAG AAAACATGAA 
    GGCCGAAATC GAAGAAACAG AGGAAGGAGA AGAAGAAGCG GCACCTATGT 
    TGCTTCGGCT AGCTAAAGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1213640 [Map]; Strand: w
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-4457-1 - 5-prime edge 
    CCATCAGCCC AATGGCATAT ATCGGTTGTT GGAGTAGCGT TGCGCCATGA 
    CAAGGAGGCG ACAAGGTTAC ATAATGTCGG CATTATGTCT GAGTTTTTGC 
    TAGTGTCGAT GGCCTTTTGT CTCACTCTGG CAGGATGATT TCTCGGAGAC 
    GCATTGCAAA GTTGTTGGTC TTCTCTAGAG GGATTGATGG GTGAATGAGA 
    AGACCAGCTT CAAGGACTTT GAGTTGCCGT CTTTGCCAAA TTTGATACTC 
    ATGTACATCA CCAAACTCCG ATGGTTTCAC GTGACGGAGA AGCTCTAACG 
    GAAGGATTAT TGTCTCTGCT CGCCTACCGG TCTAAAAAAT AACAGTTATA 
    AACATTTTAT TAATTAATCA AGAAACAGAG TTTCATTCAC AATTTAAAAA 
    CAGAGCAACT TACTTGGCCA ACAAGCGTCC TCATTAGGGT TTTCCGTAGC 
    CGAGTGTCAC TCTGTTCTGT CACCTTCATT TGCTGCCTCA TGATTTCTGC 
    AGAGGTTAAC GGTCGTCGAG GCCGAGCAGG CGGGACCGTA AAAAACCCAG 
    CCCCAGGGCT AAAGTGTCCT GAACCACTTC CTATGCTTCC ATTATTACCT 
    GGGGATGAAG GAGCTGANAC GGCCCCTACA ACTGTCCCTA CTGTCGACAT 
    TCGCCTAAAA GGAGATCGTT TAAGCATCTT TAACCCTAGC GCCCGTTTTA 
    CT

AT1G04470.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G33420.1); Has 201 Blast hits to 187 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 4; Plants - 177; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR