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11-4517-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 428512 [Map]; Strand: c
      • AT1G02210.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: -701; Region: promoter
    Flanking Genome Sequence: 11-4517-1 - 3-prime edge 
    ATGATGTAGA CTTGAAAGTC CAAAAAAAGA CTCTTGACAT TACTGAAATG 
    AAGCATCTTA ATTTGAAATT TATTCTTGTT TTCTTTCGTT GAATGGAATT 
    TGTTTATGGG GTTAGGTAGG ACTAGAATAG TACTTTCGAG GTTGATTGAT 
    ACNTTGATAG GGTACNGTCA AATAAAATTT GAGCATTTGG TTAGCTGTAT 
    GAGCAGAAAT TATACAACTT TGTCTTCACA ATGGAGCATA CATACAAGAT 
    GAGAAAGTAA CAAAACAAGA TAGACATTAT TATGTCAATG GATACAAATT 
    TGTCTTCACA AATTTACCAG TTTTATACAT ATCACACATA CAGTATGGTA 
    AAGTTACAAA CCAAGATAGA CATCATAGCA TATACTTGTA CTGTTGTAAA 
    TAATTTGGAA AGTAGAAAAG GTGTTATTGA TCACTTTTAT TGTTATCAAG 
    TTCTTGAGAT GGAAGAACAT AGGTGAATTT TCTTGACGAA TTTTTGTATC 
    ATCCTGTGAA AGAAACCAGC TCTTTTGTTC TTGATCGTCT CTTGACCCAA 
    TTTATGCTCA CCAATCTCAG TCCCTTGTGC ATCATCATAA GGATTCTTCT 
    TCTTCTCGGC GGTATCAATA CTGGTTATTA GAGCTTGGCT CACCTTGAAT 
    CATAACAAAA GAAACAAAGT CGTTTGTATG AGTGTTGGCA CAAAGTAGCA 
    TCCTTGATTG TTTGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 428396 [Map]; Strand: c
      • AT1G02210.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: -585; Region: promoter
    Flanking Genome Sequence: 11-4517-1 - 5-prime edge 
    TACATCATAT ATGTACACGT ACATGTTGTC ATGTTGATGG CTAAATCCAA 
    AACCCATTAA ACTATTGTTT ATTTGTTTAT ATTATCATAT ATCATGTAAT 
    TTTAGTAATC TTTCTTTTTC TTCTACATCA CNTTTCATTC TGTTTCTTGT 
    GAAATCCTCT GTTTCGGCGT TCAAAGACTT TGCTTTCGTT TACTATACAT 
    CAAATTACGT ACCTTATTCG TTATATCTTC TTTAGAATTA AGGAATTTTT 
    TTATGTTGCC CAAAAAAAAA NAATTTTGTT TTTCTAAATT ACCTACATAT 
    AAAAATTGTA AACCCTATTT TGCATTTTTC ATCGCTCTCT ATTGTTTTTA 
    ACTTTATGGG TTTATTCGAT AANAATGAAA TATCCGGCGG ATTTCANATT 
    CCGGCCGACA GATGACGTCA TCATCGAATA TTACCTCCTG CTAAAACATC 
    TCGGTATCAA GGAAGGCAAT ATCATCATTT CATTACCACC GTTAAAATCT 
    CTAGTTACGA TCCTTGGCAT GTGCCATGAA AGTTTTGGTC AATTAATGCT 
    AGATCATGAT TTTCTGATTC AATCATTGAT TATAGGCTGA TTTCTGATTT 
    AGGTTTTTTT TTTNAANANN NNTNNNNNCC NANNNAAAAA CCNAGGGGGC 
    NNAAAATANG GNNGGGCCCT NNNATNNNGG GAANAANNNC CAAA

AT1G02210.1

Model type
Protein coding
Short Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Computational Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 4 (TAIR:AT1G02230.1); Has 519 Blast hits to 519 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 519; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR