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Mutant Lines
11-4584-1

11-4584-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 1; Position: 8594755 [Map]; Strand: w
- AT1G24260.3 - [+] show detail - K-box region and MADS-box transcription factor family protein
  Distance: 0; Region: intron2 (CDS)
- AT1G24260.1 - [+] show detail - K-box region and MADS-box transcription factor family protein
  Distance: 0; Region: intron2 (CDS)
- AT1G24260.2 - [+] show detail - K-box region and MADS-box transcription factor family protein
  Distance: 0; Region: intron2 (CDS)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT AATTGAGAGT AATTAATTAA GGTAATTAGA 
AGAAAGAGAA GAGAATTGGG TACAACTGCT AAGGCCTCTC TTGAAGGCAC 
ATTGGGTTCT GGTGCTCCAT AGTTACACNT TTTGGTACCT CTCCAGTGTC 
CGAAGCATGC TTCACACCAC ACAAAAACAT CATTTCTTCC ATTAATCTTA 
CTCATCAAGT TCAAAACATG TTTTTAAAAA TGGGATTTTT AACTGTTTCC 
TAGGGTTTAC AACAAAATCT GTTAGTCTTT TCAGAGAAGA TCTAAAGAAC 
CCAGAAAAAA GGATGAATCC CATCCCCAAG TATACATATC CAACGGACTT 
TAGATGAATT TGACATTAGC GTCAATTCAA AACCCAAAAT TGGAAACCCC 
TAAGGGTTAC TAAAATGGAT TGTCGTGGAA ACAATATCCC CCTATGAACT 
TATATCAATC TGACAACAAA ATTAAGTGAT TTGATCGAAT TGGACGACCC 
CCAGAATCAA AAGGTGGAAA CTTTAAGCT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 8663563 [Map]; Strand: c
  - AT1G24440.1 - [+] show detail - RING/U-box superfamily protein
    Distance: 0; Region: exon4 (CDS)
  - AT1G24450.1 - [+] show detail - Ribonuclease III family protein
    Distance: -590; Region: promoter
Flanking Genome Sequence: 11-4584-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTACGGTCCG 
TAACTGGAAC ACAAAGTCGG AGTCATGCCC GTTTTGTCGT GGCAGCATCA 
AGAGAGTGAA CTCAGAGGAT CTGTGGGTGC TAACTTGCGA TGAAGATGTG 
GTGGATC
```

AT1G24260.1

Model type: Protein coding
Short Description: K-box region and MADS-box transcription factor family protein
Curator Summary: Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.
Computational Description: SEPALLATA3 (SEP3); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7422 Blast hits to 7421 proteins in 918 species: Archae - 0; Bacteria - 2; Metazoa - 630; Fungi - 302; Plants - 6411; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G24260.2

Model type: Protein coding
Short Description: K-box region and MADS-box transcription factor family protein
Curator Summary: Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.
Computational Description: SEPALLATA3 (SEP3); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7376 Blast hits to 7375 proteins in 917 species: Archae - 0; Bacteria - 2; Metazoa - 632; Fungi - 302; Plants - 6358; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G24260.3

Model type: Protein coding
Short Description: K-box region and MADS-box transcription factor family protein
Curator Summary: Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.
Computational Description: SEPALLATA3 (SEP3); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G02310.1).
Link: InterPro Scan - TAIR

AT1G24440.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G13195.1); Has 869 Blast hits to 869 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 288; Fungi - 71; Plants - 339; Viruses - 31; Other Eukaryotes - 140 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G24450.1

Model type: Protein coding
Short Description: Ribonuclease III family protein
Computational Description: NUCLEAR FUSION DEFECTIVE 2 (NFD2); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); Has 2124 Blast hits to 2124 proteins in 820 species: Archae - 3; Bacteria - 1583; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink).
Link: InterPro Scan - TAIR