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11-4605-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4245689 [Map]; Strand: w
      • AT5G13260.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon13 (CDS)
    Flanking Genome Sequence: 11-4605-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAA TACTACTCGA CTGTCTGATA TCGGTGAGCT 
    TCTTCTGGAC GCCAATAATT TTATGTTTTT TGTTGATAAA AAGAGAAAAT 
    AAATTATAAG TGACTTTAGC CAGGCTTCTA ATTTCACCAT TGAGATAATA 
    GTGTACATGT TTTATTTTAT TTTGTGTCGC ATCTTAAATT GCTATTCTAC 
    TTTGCAATTG ATGTTTTTTT CTGGTTGTTT TATATCAGAG TTAAAATCAC 
    CAGGTGGTCC TAAGATTACG GAGACACTTG GTAAGTATAT TAGCTTATCT 
    TACTGAATAT TTATGTCAAC ATCTTGGTAT TATGAAATAT AAGATATGGA 
    GTAAAGCATA ATCCACAGAG TTACAATGAC AAACTCTTGA TACTATTATG 
    ACCATGAAAA ACTTAACTTG AACGCCAGTA TCCTATGTTC CAACAGTTCT 
    TGTTATTCTT AAGGATAATT CTGACCTTGG CCTGTGGTCC TTTGCAGAAT 
    TGAGTCAAGA ANAGTCTGAG GATGTTCTCT TCAAGGAGGT ACAGAATTAC 
    AAGCCCGTTC TCGCTTTCTC TCATGGGCTT TTCCTTCATC TGATCCCTCC 
    TTCATGTTCC CTTTTGTATC GACTTTNGNT CTTCTATGTA TCTTTNGGAT 
    CTATTANAGA TAATTTTGTC AGCTCATCTT GGCCTTTCTC CATTCTCAAA 
    GCTATGAAAT TTGGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4245682 [Map]; Strand: w
      • AT5G13260.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon13 (CDS)
    Flanking Genome Sequence: 11-4605-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GCCAACCTTA GCTGGGCTAA TGTAATAGTA ATGGCAACTT CAACCTTCAA 
    AAGAACAAGT ATAGTCCATG AGAAAATGAA AGAGGGACGC ATGAACCAGA 
    ACCAGAGAGG ATGAGAATAA ACCTTTAAAG AAGTTAGCTC CTTTAGACCC 
    ATTTCCACAG AGAGCATACT TTCAATATTT CCTTCTCCTG TTAGATCATT 
    TATATCTTGA ACGAGCTGGC TCCTCTTCTC GTTCTCCTCA GATTCTGGTC 
    AGATGTTTTC ATAGCCAACA GATAAATATA CAGTAACGAG AAGTGATACT 
    CGGAGTTATA GAATGTTATC ACAACAGAAT CTTAGAAATA TGATTGAGTG 
    ATTGCTTGCC TTTTTCCCAA CTTTCTTCTT TAGCCTTCTG TCCAGCTGAC 
    AGCACAATTT CAAAAGGAAG AGGAGCCAGA GATGACCAGT ATTCGTACTT 
    GGACGTAGCT ATATCCGAAC ATATTCCTGA AATGCAAATA TGCACATATG 
    TCAAGAAGCA AAGATACACG ATGGCATGAA AGTTCTAGTT ATGTCGTTAA 
    GCAGATGTTT GTTACTCCTT ACCATATCTG GAAGCTAGAC CCCAATACCG 
    AGCTAGCCAG CACCGCTTAA GAACAACTTC CTCCTGAAAA TTTTGCAAGG 
    CTGTGTTACT TAATCCCTAC CATAAGCT

AT5G13260.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR