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Mutant Lines
11-4622-1

11-4622-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 22072440 [Map]; Strand: c
- AT1G59960.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
  Distance: 0; Region: intron1 (CDS)

TCTATGGATC ATGTTCTCTA TCAGTCACCG TGTCAATTTT CATGATTGAA 
TATTATTTTG GGAGTGACAT AACTTAATGT AATGTAAACC ATCTATGTAA 
CAAATATGGT TTTGCAGAAA CCTTAAACTG GACTATCTTG ATCTTTATAT 
AATTCATTGG CCGGTTAGCT CGAAACCTGG TAAATACAAG TTTCCTATTG 
ATGAAGATGA TTTTTTGCCA ATGGATTTCG AAGTAGTGTG GTCTGAAATG 
GAGGAGTGTC AGAGACTCGG GCTTGCAAAA TGCATAGGAG TAAGCAATTT 
TTCATGTAAG AAGCT

3 prime edge [+] show sequence

Chromosome: 1; Position: 22072556 [Map]; Strand: c
- AT1G59960.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
  Distance: 0; Region: intron1 (CDS)
- AT1G59970.1 - [+] show detail - Matrixin family protein
  Distance: -978; Region: promoter

TCCATAGAGA TATGTGAAAT AGTTTTCTGT ATTTCTCAAT CGTAAAAGTG 
TTTACAAGTA TGTTTGTATA CATCTACGCT AAACCAACTA AACCATATAC 
AATCACAATT TAACTTAACC GGAATCACAA AACCGGACTA TCATATATAC 
AGTCTAATAG TGACACCTAC TCTCAGTGAT TGAAACCGTT CATTCTAATT 
TCATGTGAAA ATCAGTAAGG AATCTAAAAA TCTTACTTCA AACTCCGTTT 
GATCGCCGGT ACGACGAGAC CACCATTTGC ATCAGCACAC CAAAGCT

AT1G59960.1

Model type: Protein coding
Short Description: NAD(P)-linked oxidoreductase superfamily protein
Computational Description: NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to salt stress; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G59950.1); Has 18939 Blast hits to 18918 proteins in 2314 species: Archae - 331; Bacteria - 12289; Metazoa - 1736; Fungi - 1658; Plants - 1296; Viruses - 0; Other Eukaryotes - 1629 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G59970.1

Model type: Protein coding
Short Description: Matrixin family protein
Computational Description: Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: Matrixin family protein (TAIR:AT1G24140.1); Has 2665 Blast hits to 2469 proteins in 210 species: Archae - 2; Bacteria - 119; Metazoa - 2216; Fungi - 6; Plants - 186; Viruses - 42; Other Eukaryotes - 94 (source: NCBI BLink).
Link: InterPro Scan - TAIR