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11-4673-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1212484 [Map]; Strand: c
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 11-4673-1 - 5-prime edge 
    ACTAAGGCAA TGGATTGAAG AGAAGTTACA AACAGTTCAA GAATGTTTGA 
    GCAGAGCAAA AGAAGCTGAA GTATGTTTAT TAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1212600 [Map]; Strand: c
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-4673-1 - 3-prime edge 
    GCCTTAGTAG TCGTAAGATA ATCGAATCGA CTTCATACGG AACCATCTCT 
    CTAACAAGGC CTTTACCGCC ATCTTCACAT TCATCTGAAT T

AT1G04470.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G33420.1); Has 201 Blast hits to 187 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 4; Plants - 177; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR