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11-4676-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20479580 [Map]; Strand: c
      • AT3G55250.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4676-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTC GTTTCCTAAA CTCAGCGAAA TCGACGAGAT 
    CTCTACCAAC GCCGCCTTCA TCGCTGATAA TTCGAGCGAG GAGTCCGATA 
    ACGGGAAGAG AACCGATGAC TTTGTTAGCG AAGGTGGAGA AGGAGTTTGG 
    TTTCTCTATG TAAGCTCGAA TTGACAAAGC GAAACCACCG TCGAGTTTGG 
    GACGAGAGGA GGAAGAAGTG GAGGGATTGA GAAGACGGAG ATGGAAGAAG 
    GAAGGAGAGA TTTGGTGGAA GGAAGTGGAG ATGTGAGTGA CAACCACCAT 
    GGCTGTGATT ATATGGAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20479629 [Map]; Strand: c
      • AT3G55250.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4676-1 - 3-prime edge 
    GAAACGAGTT GGGAATAAAT GTACTCCTGA TGATTCTAGG GCTTTCTATG 
    AGTTCCAACA GCGACGAGGC AAGGTAAAAG TTCTGATTTT GAGCTTAGAT 
    TCATGAAATT GAATTGTTGG GTATTTGTTA AAGTGTGATC AGTGTTGAAT 
    TATAGCCTTG TTGTTGCTCT GTTTTGTTGT TAGGCAGGAG AGCCTTTGTA 
    TGTGCTTCTG TGTTGTTGGG TTGCTGCAGN NGGTGCAGGT CTTCTCAAAT 
    CTGAAGAGAT TCTTGAAGGN GTTACTAGAN TTAGCATTTC CAATGATCTC 
    GAGTTTGAAG AACANAACTT CATTGCTTTG ATGACTGAAG CTAGACAGGT 
    TTGTTCTGGT ATTTGGTTCA AGTACTAAAT GTCACTCATG TGTCAGAAAG 
    GTTGATACTT TTGTTGGGTT ATACAGAGAA GAGCAAAGTT GAACATTGAT 
    GCGCCAACAA TACCGATGGA ACTAANAGTT GAAAAGGCTC TTGAAGGTAT 
    TTATGCTTGT TGCTTTCNGA GAGGACTTAT TGNNNANGAG GATGANAANC 
    TCCNNCCCNG GCCGNNACCA CNCNTGNNCN NTT

AT3G55250.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR