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11-4700-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1245969 [Map]; Strand: w
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 11-4700-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGATTAGT 
    TTATGTTTTT TCAAGTTATG TAATAATGTA ATTCCTATCC ATCTGACAAA 
    CGAACGAATC TTGTGTGTTC TTTTGTTAAT TAGTTAAATG GAGATGTGTT 
    TCTTTGTGTT CTTATTTGTC GCCTCTTTGC AATTTGCTTT TGAACAAAAT 
    CAAATCTACA AAATTTGGAT CTAAGTTATC AATAAAAAAT CATAATGAAG 
    CGATCGGAAG TGAGCGAATC CGATGAGTAC TCCAATTTTG GTCAAGGTTG 
    CATTCGGTTT GGTTGATGTC CAATATTAAC GTAACCGAAC TTTGGGGCTA 
    AAATGTAAAG CACAATAAAA GTTGGGGTTT TACTTGTAAT TTAGATACTC 
    CAAATCCGAT GAGTACTCCA ATTTTGGTCC AGGTTGCATT CGGTTTGGTT 
    GATGTCCAAT ATTAACGTAA CCGAACTTTG GGGCTAAAAT GTAAAGCACA 
    ATAAAAGTTG GGGTTTTACT TGTAATTTAN ATACTCCAAC TGAAAAACAG 
    AGTGTTCTGT TCAATAGCAC AAGAGAATTG GTGTCTCTAA CGAGATCATT 
    GATCATCGCG CACGTGAAGA CTTGGTTTTT TATTCTCTAA TGATCCCAGG 
    AATTGCGTAA TGCATCTGTT CCGTTTCGCC AGATACAGGG GTTTGCGTCA 
    GCACCAAATG TTGATTCTTG GTAAAAGTAT GAATTTTTNG GTTTGTTTCC 
    AACATTTATT GNGATNGGGG AAAAGTTTTC NGAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1298200 [Map]; Strand: w
      • AT1G04650.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-4700-1 - 3-prime edge 
    TAATAAGTAC TTCTTAACCA AACGTCAAAA CACAATTAAA AGACACAGAT 
    TTTCATCAGA CTGCCATGGT AGATCCAACA CCAGCCTTGT GCTCTCCCAC 
    AGTGTGTGGT ACATGACCAT GACCATGAGC TTGGCCTGTA GCATAGTCTT 
    ATTGCTTACT GCTCAACCTC AATTTTGGAG GGGTGCTGTA TTATCTTTTC 
    TTATTCCACT TCTTCTAGGT AAGCCAATGG TGTGCCAAAC ATTTAAACAT 
    GTCTGTTATG TCCATGGAGG AGTCTCAAGA GGAAGAGCAT TCCAACATTT 
    TCTTTCAGGT TATTTGATGC TTTTTGGTTC TGGAAGTAGG ATTCTGTCGC 
    AGCTTATGGT TTCAAAGGGA CTGAGTTATT CAATCAATGT TATGCAGCTT 
    CTTTTGGATT ATCTTCGTTT TTCTGCCTCA AGCT

AT1G04560.1

Model type
Protein coding
Short Description
AWPM-19-like family protein
Computational Description
AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04650.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR