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11-4735-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23818715 [Map]; Strand: w
      • AT5G59000.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: 0; Region: exon2 (5UTR)
    Flanking Genome Sequence: 11-4735-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTCA 
    CTCATGGGTT TTACGAGGAA AACAAAAAAC AAAATCATAA AAAAAAATAA 
    CCAAAAAAAG AATTAAAATA AAAAAAAANC AAAAAANCTA NTTTTGNCTT 
    CANGGGTTNA TNGAATTTTT TNTTTTANNA AGTTTTNANC CTTGCAAAAA 
    AAAANTGTNG GAAAAANAAA ANGGAAAAAC CTCCCACCCC GGNCCGTCAN 
    CCNCCCNNGC CCCTNNANNG ANNNNNNTNC CCCNNNC

AT5G59000.1

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G05830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR