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11-4766-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10978341 [Map]; Strand: c
      • AT1G30840.1 - [+] show detail - purine permease 4
        Distance: 2305; Region: intergenic
      • AT1G30845.1 - [+] show detail - unknown protein; Has 120 Blast hits to 120 proteins in 67 species: Archae - 0...
        Distance: -1305; Region: intergenic
    Flanking Genome Sequence: 11-4766-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTA ATATGATTGA TAAATTACAT ATCAAGGAAT 
    GCGAAATCTA TATATTATGC TACTCTAGAT ATTAGTATAT ATCCCAAACC 
    CCAAACCTTG GAAACGTAAT TAATATTTTA AAAGCAACAG ACCATAGCAT 
    TTATCTCTGT GTCTAGTGTA GGTTCTTAGG CACAGTCTTA GGTACCAACT 
    CTGTCAGAGT TTTGATGTAT ATTGGTATGA TAATAGACGT GTGAACCTCC 
    CTATTACAGC TCAAATCTGT CATCTATAAT CTTTGGAATT TAATCTCTTT 
    CTAATCTCCA AACCTATAAC GAAGCAAGGC CCCTTTCATA TACATATATA 
    TCAACATGCA TTTTTTTAAT TTTAGTCTAT ATATATATTT GACCAATCTC 
    TATCATTTTT AGGGTTGCTT AATGGCGTTA TTCATTAGTC ATTCATTACA 
    TTCGCACTTT CGTTAATCAT GCCCTCAGTT TTTTATTCAA CCCAAAAGTC 
    CATTCACTGT ATTCTCATCT CTTTTTGAAA ATATTCCATC GATCAAAAGA 
    GATCTATATT ACAAAACCTT ATAAAAATCT AGATAATTAA TTTAATCAGC 
    TTTAAGATTG ACAAATATTA GATCGACGAG TATTCATGCT TTATGCGTAC 
    CTATACNAAN AACTGCTTAC TTATTATTTA CAATTGAATA CAAGTNTATA 
    CATGCAATCT ATCAATATTG TTTCATAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10933003 [Map]; Strand: w
      • AT1G30790.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-4766-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT CTATTAGAAA CAGTTAGAGA AGGTATTGTC 
    GTATCGAGAT TGGTTATCAC TGAAGAAGAA GATTCATGTC CCTCGTGTGA 
    GGACGAGAAG ATGAACAAAC GCTTCTCCTT ATCACTGGGA AATGAACCGT 
    TGCTGAAAGC GACTATAAAC CGTGGTCGTG TTGAGGAAAT GGAGTAGAAG 
    GAATCGATGA AGCT

AT1G30790.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G32660.1); Has 2039 Blast hits to 1970 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2039; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G30840.1

Model type
Protein coding
Short Description
purine permease 4
Curator Summary
Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.
Computational Description
purine permease 4 (PUP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 1 (TAIR:AT1G28230.1); Has 652 Blast hits to 644 proteins in 132 species: Archae - 10; Bacteria - 158; Metazoa - 37; Fungi - 9; Plants - 358; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G30845.1

Model type
Protein coding
Computational Description
unknown protein; Has 120 Blast hits to 120 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 37; Plants - 23; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR