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11-4770-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1234955 [Map]; Strand: c
      • AT1G04530.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 11-4770-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TAAACTCTGC GGATCAATGA ATGACTCTAA 
    TTGTTACCTG TTATTGTTCG ATCTGACATT GAAATTTTTA GGCATCTTAG 
    CTCATAGTAG ACATTTACTA GCATATAAAT TCAAGTTTGT ATTCTGCCTG 
    GTGTTGTTGT TCATTGGCTT TTCAATTCAA GTCTCTAATG TTGGCGTTTA 
    TTTTTGTCCC CGAAAAAGGC TGATGCAGCG GGAAAAAGCA AATCAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1234956 [Map]; Strand: c
      • AT1G04530.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 11-4770-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTAAACCAAA TAATCTATAG AGCTACGACA CAAAACCCAC CTCAAATTCG 
    TCTTTTCCTT GTCCAGAAGA CTCATCATCA TCCTCATCAT CATCCTCATC 
    ATCATCATCC GCGTTTATCT CCCAGAGGAA ACTAGCATAT GCNTGCAAGA 
    ACAATGCNTG AAAAGAAAAA ACATATTATT ATCACAGGAA CTGATAACCA 
    ATGGTGGTAT TTCCAAAAAA TGTTCCAACA GACCTATCAT CAGGAGATGC 
    TTGAACTGCA CGTTCAAAGT AGCTCATGGC TTTAGCTTCA TCTTGGTGAA 
    GCT

AT1G04530.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G17940.1); Has 713 Blast hits to 362 proteins in 65 species: Archae - 10; Bacteria - 98; Metazoa - 37; Fungi - 8; Plants - 512; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Link
InterPro Scan - TAIR