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11-4801-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1225672 [Map]; Strand: c
      • AT1G04510.1 - [+] show detail - MOS4-associated complex 3A
        Distance: -903; Region: promoter
      • AT1G04510.2 - [+] show detail - MOS4-associated complex 3A
        Distance: -903; Region: promoter
    Flanking Genome Sequence: 11-4801-1 - 3-prime edge 
    CTTATCAACA TTCTATTTGG TCCCCAACTC TATGAAGCAT TATTTGAAAT 
    CATTAGCATG ACTATCTAAG TTTTTTTTCT CCTGATATTT ATCCAAAATT 
    TTATTTCATT CAAATTGTTT AACAATATGT ACATATACTA TATGTATTAT 
    ATAAAATACA TATCACCACT CAGGCAATTT TTTAAACTTA TATACAGTAT 
    GTGATAAAAT AAACATGGTC ATACGTTTAA GAATTGGAAA TTAATGAGGT 
    TGCAAGAAAT CATTTAACGA GAACAGAATG AAGAGAAAGA AAAAAATAGC 
    AACTTGGTGG CAAAAGGAAA AAGAAACAGC TTGAGATCAA AGCTGATTTG 
    ATGAATCGAT ACTTTGGAGA TATATATGAG CATCTTCGGC AAAAGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1225556 [Map]; Strand: c
      • AT1G04501.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 876; Region: intergenic
      • AT1G04510.1 - [+] show detail - MOS4-associated complex 3A
        Distance: -1019; Region: intergenic
    Flanking Genome Sequence: 11-4801-1 - 5-prime edge 
    TTGATAAGTG ATGTGATGAT GTCCCGTTCC CAACCATGAC CAAAACAAAT 
    AAACTAAAAA AAGCTAGAGG AGAACGAAAA AAAAATCGTC GTAATTACAA 
    TAGTAATTAA TTAATGCGTA TAGTCAATGA AAGTTGTTTT TANAAGTTTT 
    GAAGTGAAGG GATATTTTGA ACTTAGCTGA GTAATAGTCC ATGAAAGTTA 
    GATTATTCAC CTAGCTTACA TTTTTTCATA GTTNGGGAAT T

AT1G04501.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04510.1

Model type
Protein coding
Short Description
MOS4-associated complex 3A
Curator Summary
Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.
Computational Description
MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 53700 Blast hits to 26315 proteins in 787 species: Archae - 70; Bacteria - 7824; Metazoa - 20612; Fungi - 11571; Plants - 6404; Viruses - 0; Other Eukaryotes - 7219 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04510.2

Model type
Protein coding
Short Description
MOS4-associated complex 3A
Curator Summary
Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.
Computational Description
MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR