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Mutant Lines
11-4841-1

11-4841-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 1422037 [Map]; Strand: w
- AT1G04990.1 - [+] show detail - Zinc finger C-x8-C-x5-C-x3-H type family protein
  Distance: -248; Region: promoter
- AT1G04990.2 - [+] show detail - Zinc finger C-x8-C-x5-C-x3-H type family protein
  Distance: -398; Region: promoter

AACCTAGCTA GACCTTGGCA GCTTGGCTCT TTTTCAAGTT TTAACCATCG 
GTTTTCCAGA GAATAATACT GAATTACCTA CTGACTATAC AATTTTCTTG 
TAATGAAAAT ATATGATTTT ACTAAATAAA AATAAAATAT CATCCAGATA 
GGGGTAAAAG GGTAAAATAG TCAGAACAAA TGTAATTCTT CTGGCACAAG 
AAATCTTATG CCTTCGCAGT TTGTAAAGTG GTTGGGACCC ACCGGTAGAA 
AAAGGGACAG AATCGGAGGT TACGATTCGC TGGTCACTGG AGCAGCGTAA 
GAGCTGTGAT CTTTAGACGT CAGTATTACG CCACGTTAGC TTACGAGGTA 
GTGATCCTCT GCTCTGATGA CCACCTATGT TCTTTTCCGT GATTTTGACG 
CTTTTCTCTT CTACTGGTTT GACCGTTCCA AATACTTGTT ATTACACGTC 
AACAACATAT TAAACAAAAA AAAGTATAAT GGATTCGGCT TTTTGTTATT 
TTTCTTTTGA CTCTCCCCTT TAATTAGTTT CCTATGACTT CAAGTTTCCG 
TCTCCTACTA NATTAAGGTA ATGTATGTGG AAAGGGTTTT TATAAAGTNT 
GAATTTTGGA CTCTGTTTNN AAATGGAATT ACCANCCCGG GCCGNNGACC 
ACNCGGCCCN T

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 1421921 [Map]; Strand: w
  - AT1G04990.1 - [+] show detail - Zinc finger C-x8-C-x5-C-x3-H type family protein
    Distance: -132; Region: promoter
  - AT1G04990.2 - [+] show detail - Zinc finger C-x8-C-x5-C-x3-H type family protein
    Distance: -282; Region: promoter
Flanking Genome Sequence: 11-4841-1 - 3-prime edge
```
GCTAGGTTCA CAATGAACCG TCACATTGAA GATATCAGAC CAG
```

AT1G04990.1

Model type: Protein coding
Short Description: Zinc finger C-x8-C-x5-C-x3-H type family protein
Computational Description: Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger nuclease 2 (TAIR:AT2G32930.1); Has 1789 Blast hits to 1100 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 576; Fungi - 244; Plants - 789; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04990.2

Model type: Protein coding
Short Description: Zinc finger C-x8-C-x5-C-x3-H type family protein
Computational Description: Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger nuclease 2 (TAIR:AT2G32930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR