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11-4892-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24037322 [Map]; Strand: w
      • AT5G59660.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 11-4892-1 - 5-prime edge
    GATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCCGGC CTCCACACCA CCAAGAATCA CTTCTTTGTA
    AGTCATGAGT TCACTAGTAC ACATGCACGC ACAGTCACTC TTCAAATCCG
    TTGGTAATCA TGATCATTAA CAACTTTGAA TGTGGTTTTG AAAATGTCAC
    CAGAAACTTG TCTTCGAGTG GTTTAACNTG GAAACATAGC AGCTGCCATT
    CAAAACCTTA CGCAACTAGA AAAACTGTAA GTATGTCCAT TGTTAGTTGT
    AAGCAAGAAA TTGTTCTATA TATGCGAAGA AATCAGATGT AATAATAGCA
    TAGATAATTC TCTCTTTGCT AACATTAGGG ACTTGTCGAA TAACAACTTG
    ACCGGAGAGG TGCCGGAGTT TCTAGGCAAC ATAAAATCAT TGTTGTTCAT
    GTAAGTGTCT CTCAAGCATA TTTTCTAATG CTTTTCCAAT TCTACCTCAG
    GTTCATTGCT CTGTTTTTTT TTCTGGAAAC AANATTCATT GCTCTTTTAA
    TGCANAAACT TAAGCGGGAA CGATCTTAAC GGTACAATTC CTCAATCCCT
    ACAAAGGAAA GGTGGACTCC AGCTACTGTA AGAAACTTCC CACATATGTT
    GTAAACTTTT CTCTGTTATC ATCCACAACC CTTTTGTGCC TCTGTCTNGA
    AACAACACTT GTCTTTTTAT AGCCGTCAAG GAAACTCAAG GCTTTTTCCC
    TCTGAATCAN CCACAAACCA ACTAGCAAGA GCTT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24017975 [Map]; Strand: w
      • AT5G59616.1 - [+] show detail - Interleukin-1 receptor-associated kinase 4 protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-4892-1 - 3-prime edge
    GTGGAGGCAT CCGTGTTGCT GCAGTTGTAA AGCGTNCCAC CTAAGATGTA 
    GAGGGACACA TGGATCACCT TGCCAGTTTA TTCTACTCAA TTCATAGGTG
    GCTTCAATGT TTCTGATAGC AACCACTGAC ATAAATAATT TCTAATATGT
    CAGAGAGAAA CATTAAATAG AATTAGACAT TATATGCATA AGGTTGAAAC
    ATACCGTCAG TTTCATTTGT TTCAGACTGC GGAAACTGGA TAGCTGTGAA
    GACTTCAAGA GCGTTAAGTA GAGGTGGAAG AGTTGATCTA TTGGTTCTTT
    TCAGCTGAAA AGTACAGTCC CCTCCATCGC AAGTCCTTGG AGACTCGCTG
    TAGAAAGTAC TTATATCTAG CTTATTAGGA ATCACAGGGT TAGCAGACAT
    AACATCTCCA TTCCATAGCA TGTTGAATT

AT5G59616.1

Model type
Protein coding
Short Description
Interleukin-1 receptor-associated kinase 4 protein
Computational Description
Interleukin-1 receptor-associated kinase 4 protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59660.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR