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11-4911-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1670847 [Map]; Strand: w
      • AT1G05590.1 - [+] show detail - beta-hexosaminidase 2
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-4911-1 - 5-prime edge
    CATGTGCCAA TATGTTCTGG TGGCCTGCTG GAAAAAGTTG GGAAGAGCGG 
    TTAGCTAGTG AACCTGGGAC TGGTCAGCTT AACCCTTTGA GTCCTAAAAC
    ATATGAAGTT GTTAAAAACG TCATACAAGA TATCGTTAAT CAATTTCCAG
    AATCTTTCTT TCATGGAGGT GGAGATGAAG TTATCCCAGG CTGTTGGAAA
    ACCGATCCTG CCATCAATTC TTTCTTGTCC TCTGGTGGAA CACTAAGCCA
    GCTTCTTGAA AAGTACATAA ACTCGACATT ACCTTACATC GTGTCACAGA
    ACCGCACAGT TGTTTACTGG GAAGATGTTC TGTTGGATGC ACAAATCAAG
    GCGGATC

AT1G05590.1

Model type
Protein coding
Short Description
beta-hexosaminidase 2
Curator Summary
Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). Chitotriose-PA was digested almost completely overnight by a 50% ammonium sulfate fraction of a supernatant yeast expressing AtHEX3.
Computational Description
beta-hexosaminidase 2 (HEXO2); FUNCTIONS IN: UDP-glucosyltransferase activity, hexosaminidase activity, beta-N-acetylhexosaminidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883), Beta-N-acetylhexosaminidase, subunit a/b (InterPro:IPR015882), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 20 (InterPro:IPR001540), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-hexosaminidase 1 (TAIR:AT3G55260.1); Has 3806 Blast hits to 3725 proteins in 709 species: Archae - 2; Bacteria - 2403; Metazoa - 477; Fungi - 234; Plants - 128; Viruses - 0; Other Eukaryotes - 562 (source: NCBI BLink).
Link
InterPro Scan - TAIR