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11-4927-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20159458 [Map]; Strand: c
      • AT1G54010.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-4927-1 - 5-prime edge
    GATATCAGCT TGTTGTATTC ATCAGGAGCG AGTAAATTTG TGATCCAAAC 
    CCTAGCTCCA TTGGGTTGCT TACCCATCGT CAGACAAGAG TTCAACACCG
    GGATGGATCA ATGCTATGAG AAACTCAACG ATTTGGCTAA ACAACACAAC
    GAAAAAATTG GACCGATGTT GAACGAATTG GCTAGAACAG CTCCTGCATC
    AGCTCCTTTC CAATTCACCG TCTTTGATTT CTACAACGCG ATTCTTACTA
    GGACGCAGAG GAACCAAAAC TTCCGTGAGT TGGTTAATTA TCATGGTTTA
    ATTTCATTTT TAAATTTTTT TATAACTTCT AATACCATGT GTTTAATATT
    TGCCATTCTT AGGATTTTTC GTTACGAACG CATCGTGCTG CGGAGTTGGG
    ACACATGATG CTTATGGTTG CGGTTTTCCT AACGTACATT CGAGGCTATG
    CGAGTACCAA CGGTCTTACC TATTCTTCGA CGGACGTCAC AACACTGAGA
    AGGCGCAAGA GATGTTTGGT CATCTTCTTT TTGGAGCCGA TACAAATGTT
    ATCCAACCGA TGAACATCCG TGAGCTTGTC GTTTACCCTG CCGATGAACC
    TATGCGTGAG TCTTGGGTGC CCCCAACGTC AGCCACCGTT CAACTCAGGG
    AGAGCCGCGG TTACGAGTAT TACTGAGTCT CTAAAATCAA TATTTAGGGA
    TCGATC

AT1G54010.1

Model type
Protein coding
Short Description
GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G54000.1); Has 3090 Blast hits to 3062 proteins in 114 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 2943; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link
InterPro Scan - TAIR