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11-4973-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15169264 [Map]; Strand: c
      • AT2G36145.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon3 (CDS)
      • AT2G36150.1 - [+] show detail - pre-tRNA
        Distance: -314; Region: promoter
      • AT2G36160.1 - [+] show detail - Ribosomal protein S11 family protein
        Distance: -554; Region: promoter
    Flanking Genome Sequence: 11-4973-1 - 5-prime edge 
    CTCCTAAGAG ACTTCTCATG ATTCTTTCTT CTCCCGGAGG TGCTTTATCT 
    TTCTTCCGCC CATTACGCGT CGCTTGGAAC ACTACACCAT TCTCTGTTGT 
    TTGGAAAACC AAACAGTCAA TGTAAACCGG AACATCGGTC TTGCCTTCAT 
    CTTCCATCAC TATGAATCCT AACCTCGCTC CTCCGCTTAT TCTGTCCACC 
    TATAACAAAA AAAAAAGGGG CTTNTNANCT TTTNACAATT NATATNANCC 
    GNANCCAAAT TNGTGGACAT ANAATTTTNG AGTAATCGCA AAATNAGNNC 
    CTNGAAAGGA ACAGGTAAAG GTAAATGGGC TCCTNGGNAA AAACTATTCN 
    CCCACNGTNG NANCAAAACA AAAAAAAAAN NTAAANGTAA AAAAAAAAAN 
    CCTNAAANGG GGGGGNNAAN CCCCCNCCNT NGGGGNAAAA ACCCNCCCCN 
    TTNANCNANN GGNNNTTTNC NNCTTTTGGG NGNCNNAAAN TTNCCCGNAA 
    AAAAAAAANT TTNAANTTTA NNNAAANGGG TTTTTNGGGN ANGTTCCCNC 
    CNGGGGCGGG NANCCNCCGG GGNNNNAANA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15169380 [Map]; Strand: c
      • AT2G36145.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon3 (3UTR)
      • AT2G36150.1 - [+] show detail - pre-tRNA
        Distance: -198; Region: promoter
      • AT2G36160.1 - [+] show detail - Ribosomal protein S11 family protein
        Distance: -438; Region: promoter
    Flanking Genome Sequence: 11-4973-1 - 3-prime edge 
    CTTAGGAGCC CTCAAAAAAG CTGTGGAGAT TGCTCGAGTC ACATAAACAT 
    TTGCCTCTTT CAGTTGAAAC CGAATTTCGA ATATCTCTTT TGCTCTATGT 
    CTTTCTAGTT TCTTACTGCT ACTACTACTT ATCTGAGACA TGATCACNTG 
    GTAAATAATA AAGTTTTAAA GTTTGGGGTC ACATGAGGAA ACAACACTAG 
    CAACTAAAGT ATTATGCTAT AAATAATCGT GTTGCAGGAG CTATCAACAA 
    ATGACAATTT GGCCGAGTGG TCTAAGGCGC CAGATTTAGG CTCTGGTCCG 
    AAAGGGCGTG GGTTCAAATC CCACAGTTGT CAAATATTTT TTTTATATTC 
    TTTTGTCCAG ATATCGTTAA AACGTCGTCG TTACAAAGTG GGCCGAAGAA 
    CCCAACAAGT AANATTCGGC CCAAATTTAC GTGGAAACCC TAAACGCTCG 
    TTTTCTCACT AANAAGTCTC ATAAACCCTA ATATATAAAA GCGATTTCTG 
    ATTCTTCCAT CGTTTCTCTC TTGCAAAACT CTGTGTGTAG GCGGAACTAC 
    AGAACCAAGA GCCTCTTTCT AATCGGAGTT ACTTTAATCC CCTTGAACCA 
    TGGTAAGCCT CTTCTGCGAA AAGTTTTCAT CTTTTCTCCG ATTATCTCAG 
    ATTGGTTTGA GAATACATAT GTANATTTTG GTTGTTCCAT TGTTTCTTCN 
    AGTCTTTNGG AGTN

AT2G36145.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G36150.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Leu (anticodon: TAG)
Link
InterPro Scan - TAIR

AT2G36160.1

Model type
Protein coding
Short Description
Ribosomal protein S11 family protein
Computational Description
Ribosomal protein S11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT3G11510.1); Has 8774 Blast hits to 8774 proteins in 2901 species: Archae - 250; Bacteria - 4863; Metazoa - 587; Fungi - 162; Plants - 736; Viruses - 0; Other Eukaryotes - 2176 (source: NCBI BLink).
Link
InterPro Scan - TAIR