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11-5009-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19977226 [Map]; Strand: w
      • AT3G53950.1 - [+] show detail - glyoxal oxidase-related protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5009-1 - 5-prime edge 
    GTTTTCTCAA GGTCAACGGC TCGTTAAGTT GACCGTTGCT CCGTCTGTGC 
    CTGACGGAGT AGGTCAGTCT ATACGGATCT CANTGTACAG GCTCCACCTA 
    ACAGGCAGCC GTTTCTCCGC CTGGGTATTA TATGGCCTTC GCTGTTAACC 
    AGGGAGTTCC TAGCATTGCT CGATGGATAC AAATAGTTTC TTGATTTAAA 
    ACCAGAGGAG ATATTTAAAA TGTTAATTTG TTAAATAGTT AAACACATCA 
    TGTAATATAA ATATTTTCAT GGAAAAACTT ACTCCGCAAA GTTAACCATC 
    TTAATTTGAT CTGATTCAGT TTANACTTTT AGTTATTAAG TTAAAATGAC 
    TATAAAATCA CTTTTCAAAA GTGCAACAAA CAGTAAACAC ACACAAAAAG 
    GAACAAAAAA TGGTTATCAT ATGACCAAAC CAATAGCTAA AAGTTACATA 
    AACTTGGACG TCGTCACCAC CGTCACCAAC AACAGCTTGA CTCGGCTACA 
    CACTCTTGTA AGTGTCTTTC ATGCCCACGA TCACATAAGC ACATATTANC 
    AACGGTCAAA GTGGCTANCA TCCANTAAAA GCGGTCCATG CANCTGCTAT 
    TAAGGTCTTT CCCNAACCAN CCCTTNCCTN GNGACCNTNA AAGGCTTGCA 
    CCCTAATNTN TTTTAAACTN AANATTNTTN TATGAANCTN CCANCNCGGC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19977110 [Map]; Strand: w
      • AT3G53950.1 - [+] show detail - glyoxal oxidase-related protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5009-1 - 3-prime edge 
    GAGAAAACGA ATGAGTCGCA AAAGGCGCAC TTCCCCAATT CATCTGAATT 
    ATCCCCACCA CCAGCAACGG CACGGTCACG AACACGTCGA AAACCTCTCC 
    GTACCGTATG ATCTGCGGGA TTTCTTGGAT CTCTGGTCGG AGATTAGCTC 
    GATCCGGTGA CAGATACTCC GGTGAAAACG CTTCGATCCG TAGCTCCGTT 
    GGGAATT

AT3G53950.1

Model type
Protein coding
Short Description
glyoxal oxidase-related protein
Computational Description
glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G75620.1); Has 849 Blast hits to 839 proteins in 169 species: Archae - 0; Bacteria - 325; Metazoa - 1; Fungi - 246; Plants - 262; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR