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11-5022-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19720847 [Map]; Strand: w
      • AT5G48620.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-5022-1 - 3-prime edge 
    ANTGNGTNGG ACTTTGTAGT AATCTTCTCC ACCTGGTACC AGTTNCTCCT 
    TCCACTCCCT CTTCATTTCT CTAATCTTTA GCTCCTTTAA GGATGTTATG 
    TACTTGAGTC CATCAGGAAG TTCCTTCAAC TTTTTGCAAT CAATTATAGT 
    CAAAGTACCG AAGACATGGC ATCGACCCTT CTTCTACTAT CCACTCTTCC 
    AACTCCGGTT GTTCAGATAT TCTTAGGGCA CATAATTGAG GAAACCCACC 
    TTTTGAGCAC ACCATTCTCC TCCCAACGAA AGCCTCAACT GCTAATTGAA 
    CCGACTTTAA ATGAAGCAAC TTTTCTAGAA TTGGCATTGG ATC

AT5G48620.1

Model type
Protein coding
Short Description
Disease resistance protein (CC-NBS-LRR class) family
Computational Description
Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR