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11-5033-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 485062 [Map]; Strand: w
      • AT1G02391.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -1143; Region: intergenic
      • AT1G02400.1 - [+] show detail - gibberellin 2-oxidase 6
        Distance: -1739; Region: intergenic
    Flanking Genome Sequence: 11-5033-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT ATATAAGTTC AAGAAGAGAC GTATAAAATC 
    ATAAATTAAT ATCGAATTGT TTAGCAAATA TGGTCACCAA AATTTAAAAT 
    GATAAGAGTT AGGTTTTGAT ATAACCGATA TGTATGTTTC ATTCATGGGG 
    ATAATGTCGG CTAATATGTC AGATGACATG TTCATTGATC CATCCTGTCT 
    CTGGTCAATT TTTCTCCCAT ACTTATTTTT ATATTTTCTA TCTTTAATAT 
    TTAGAGGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 485070 [Map]; Strand: w
      • AT1G02391.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -1151; Region: intergenic
      • AT1G02400.1 - [+] show detail - gibberellin 2-oxidase 6
        Distance: -1731; Region: intergenic
    Flanking Genome Sequence: 11-5033-1 - 3-prime edge 
    ANTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CTGAACTTAT ATACACAATT TTAGATCAAT TATGAGTCTA AAGTAGACAG 
    TCGGTCACCA AACTCCAAGA CATCCAATCT GAGGTTTCTG TTTTTTTTTT 
    CATTTATTTA TGTTTTNATT TAAGTTNACC TNGGTNTTCA ATTTTNAAGT 
    NTCANCCGTN GTTANACAAN GTANCGTACC ATAAATNCTA ATTTCAGCNT 
    TGATAAAATN CCAATTTCAT TAATNTTACT AGTNNGGNGG TTNGGATC

AT1G02391.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02400.1

Model type
Protein coding
Short Description
gibberellin 2-oxidase 6
Curator Summary
Encodes a gibberellin 2-oxidase that acts on C19 gibberellins but not C20 gibberellins.
Computational Description
gibberellin 2-oxidase 6 (GA2OX6); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 4 (TAIR:AT1G47990.1); Has 8143 Blast hits to 8109 proteins in 973 species: Archae - 0; Bacteria - 1087; Metazoa - 68; Fungi - 840; Plants - 4773; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink).
Link
InterPro Scan - TAIR