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11-5048-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12121768 [Map]; Strand: c
      • AT4G23140.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 6
        Distance: 0; Region: exon1 (CDS)
      • AT4G23140.2 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 6
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5048-1 - 5-prime edge
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTCA GTATGCACTC CTCGTAATAG AACACGGCTT
    CTCTCTTATC AGAACACCGA TTAAATGTGT CGTTGACGGC AAAAGTAACG
    CAGCTACGGC AAACTTCTGG CGAGAAGTCT CCCCGGCAAA GGAAAAGTCC
    GGTGACCCGG TCGGGGGCTT TTCCTGACGT GGCGTTTTGG AATCCGGTGG
    AGTAAGAGGC GTTACGTGAA GAGAGAGAAG ACAAAAGTGT TTTGAGATTG
    GTGAAGTAAG TGCNTGTTAC TTGAGTAATT TGTCGTAGTT AGACATCCCC
    CATTTAGGTA ATAAGGTTTT TGAGCAGAAG CACTGAAGCT AGTGAGGAAT
    GAGAAAAGGA AAAGGAACAT GAAAGAGATC AGAGAAGACA TGGTTCGAGT
    TCCTTGATTT GAGTTTCACA TCATAGAGCT CCCATTTATA AACTGAAAAG
    GTTTCTTCTC TCTCTCTCTC TCTGATTAGT ACTGCTGAAT AACGTGAAGT
    AAAAGATGGT TTGTGACAAC GATACCTCAA TCAAAGTCAA TAAGTCAAAG
    TAAACGATTC TAATTTTTTC TTTCAAAAAA ATNTGGTTCC ATAGTTAAAA
    TTAAAAAGTA NACTAAACGA TNGCTCTCGG ATATCATCTA NCTACTATGT
    ATATGGTTTA AGATANCNNN CTAATTAATT TCTTAACCTN TAATNGNGAT
    ATGATAAA

AT4G23140.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 6
Curator Summary
Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (CRK6); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G23140.2

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 6
Curator Summary
Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (CRK6); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 119608 Blast hits to 118061 proteins in 4543 species: Archae - 108; Bacteria - 13357; Metazoa - 44377; Fungi - 10093; Plants - 34036; Viruses - 376; Other Eukaryotes - 17261 (source: NCBI BLink).
Link
InterPro Scan - TAIR