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11-5083-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1217826 [Map]; Strand: c
      • AT1G04480.1 - [+] show detail - Ribosomal protein L14p/L23e family protein
        Distance: 359; Region: intergenic
      • AT1G04490.2 - [+] show detail - Protein of unknown function (DUF3527)
        Distance: 122; Region: intergenic
    Flanking Genome Sequence: 11-5083-1 - 5-prime edge 
    CACGGCTCCT ACTCTCTTGT TGTGATCATC ATATCGAATT AGATTTGTAA 
    AATATATAGC AGAAGCAGAT TCCTTAAGAC TTGATTTATA TACAATCTAT 
    GTATTAAAAA AAATCATCAG ATTAATTCTC TCACAAAGGA ACAAAAGCTA 
    TCGAAGGAAA GAAAAGTGAA ATCTTTTTTG TGACCGTTAA ACCGTGATCT 
    TTTTGTGACC GTTAAACTGT GATTTTGTGA CCGTTAATTG TGATTATCAA 
    TTACCTTTTC TTGTGCATAC AAATAAGAGT CTCAACGCTT CTTCTAATCA 
    AAGCCGATGG TGATAATAAC CGATGGTGAT GATCTCTGAA ACAACCGTAA 
    TTGATCGGAG CGAAATCACA TCATCATCGT TTCGTGATTG AATGAGAAGT 
    TACAAACGTT GCACTGTAAG CACCTTCCAC ATTTTAACTA ATTAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1217898 [Map]; Strand: c
      • AT1G04480.1 - [+] show detail - Ribosomal protein L14p/L23e family protein
        Distance: 431; Region: intergenic
      • AT1G04490.2 - [+] show detail - Protein of unknown function (DUF3527)
        Distance: 50; Region: intergenic
    Flanking Genome Sequence: 11-5083-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ATGATGCATG CTTTGGTTAG AGAACAAACT TGGTAGCAAC TAAAAGCT

AT1G04480.1

Model type
Protein coding
Short Description
Ribosomal protein L14p/L23e family protein
Computational Description
Ribosomal protein L14p/L23e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT3G04400.1); Has 9301 Blast hits to 9300 proteins in 3178 species: Archae - 321; Bacteria - 5427; Metazoa - 383; Fungi - 266; Plants - 815; Viruses - 0; Other Eukaryotes - 2089 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04490.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF3527)
Computational Description
Protein of unknown function (DUF3527); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT2G33360.2); Has 121 Blast hits to 119 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR