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11-5090-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3616009 [Map]; Strand: w
      • AT1G10865.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: intron1 (5UTR)
      • AT1G10865.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 11-5090-1 - 5-prime edge 
    CTNTNAATCA CAGNATAAAC CATCTGATTC CTNTGTNCTA TTTNTCGCTA 
    AAAACTCATN CTTGNCTCAA AAGAATATGA TCAAGAGCCA AAATTACAGA 
    GCAATACAAC AAAGATGATC TAAAGAAAGA AGATTGACNG GTTACCGACT 
    TACCGGCGAC GGTGAGTAAA AAACGGATCA ATGTCGACGA AGACCCGANA 
    GACGGAGGTT TTTCCAAAGG GTTTGGTTTT CTTCAATTTG GCCTTTGCCG 
    AATAACGCGT GGGCCGCGTG GCTCTCTNTG TGCNNATNGN NNCTCTCNAT 
    TGGGGNNGGG TANNACANNT NACNNGNGNA AANNGCTNTA TANTGGGGTG 
    AGNGGNNTNT CAANNTNAAG CGNGGGTNNA AANTANCTNT TNTGGNAGAG 
    CTCTCTNCNG NNTNTGNGNN CGCANNAGAA NATTATNCNC NANACGTTNA 
    GANTGNGANN GGATAATTTN TTATNTCTGN CGNGAGTTGT NGNNNATNAN 
    NCNTTTNNNA ANAAACNNTG CNNGNAANAC ANNTGTGATG NNATNTTTTT 
    TTNCCCTACN ACNAACTNTT TTNGTNNCNC NACACNAATN GGNNNNNNTG 
    NTGAANANTN NCTTTTNAAA NNNNNANATA AAAAAAATNN TNGNGCNCNT 
    TNAGTANNGG AAAANTNTAT NNCNNTCNTT CNTTCCTGTN TNTTTNGCAN 
    AAANNANNNG NTNANGANNN GA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3615893 [Map]; Strand: w
      • AT1G10865.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: intron1 (5UTR)
      • AT1G10865.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 11-5090-1 - 3-prime edge 
    ATTGAAAGAG AAATACTTTC CTGTGGAGAA ATCGGGATTT TTTCCAAGGA 
    TTTATCATAA GTTTGAGATT CTTAGAAAGG GGAGTTCTTT AGATTCTTCG 
    TGATCATCAA ATGAAGAAAG GAAGTATTTT ATGTTTATTG AAACGGGACT 
    TTTGGATTGT TCCCAATAGG CAAAAGCAAA GCT

AT1G10865.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 241 Blast hits to 241 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 94; Plants - 38; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G10865.2

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR