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11-5100-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 516872 [Map]; Strand: w
      • AT1G02490.1 - [+] show detail - unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BL...
        Distance: 138; Region: intergenic
      • AT1G02500.1 - [+] show detail - S-adenosylmethionine synthetase 1
        Distance: -1379; Region: intergenic
    Flanking Genome Sequence: 11-5100-1 - 5-prime edge 
    ATTCTGACCA CTACATAATC TACAACTCCA TGGCTCTGAA GGAAGGTGGT 
    AGTGATGGAA TCTTAATGGG CTATTTTTAA CTGATTCGAA ATGGTTATTT 
    TTTATATATT GGGCCACTTG GCCTGAAATG GGCCTTATTG GCTATGTATC 
    ATTTTATTTC TGAGACAGCC TTTTTAGAAA GATAGTCCTT TATGGAAAAA 
    TTGACTTTTA AAAACACAAG TTTATTTACT TAAAAAAATA TCCGACAACA 
    ATAGTCAATG AGGATGAGCA ATTGCGCATG GGTTTTGCAC ACCATCGAAT 
    TTTCTTTATA AACTTAACAA AAAAAACTCT TTTTTCTCAA TCACTAATCA 
    GCTTTACTTT TCATTAGAAA TCACAAAAAG TAAATAAATA AAAAATTTAC 
    TTACTGCGTA ACTTATGAAG ATATATTATG AGCGAGTTAN AAATACACTA 
    CCCACCTCGC CACCCAGTCA CCCACTACCA AAAGAGGAGN GGCTACAAAC 
    ACCTTCTAAN ATGTTNGCAC TNTTTGTTCC TTTNGTTTTT GAAGGATCTT 
    ATATTGTTNG TTTCATTAAC AGCTTTTATA TATCTGNTTC ATGTAAAAGT 
    AAAACAATAA AGTTTTGATG ACAAATNGGT AACTCTAGTC ATATTTAAAA 
    TTACGAAAGA ATNACGCCCN CNCCCACAAA TANTAAAATT GAAGAATTTT 
    ANGGGATNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 516756 [Map]; Strand: w
      • AT1G02490.1 - [+] show detail - unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BL...
        Distance: 22; Region: intergenic
      • AT1G02500.1 - [+] show detail - S-adenosylmethionine synthetase 1
        Distance: -1495; Region: intergenic
    Flanking Genome Sequence: 11-5100-1 - 3-prime edge 
    GTCAGAATCA AGATTGAGGA TGAATGACAT GATTGCTCTG GCCCTAACCA 
    AAGCAATTGA TTGCTCCAAC ATTCTCATAA CCAGGCCGCT TCTATCTCCC 
    ACACGCAGAC TAGGATTGGT TGCCTGATGT CAATGTCTGT TAGATCATCA 
    ATTACNTGCT GCCTCTGTTC CAGTTAACAT CATCATCTCC ATTTATTAAC 
    AGCTTGGTTC AGAACCATCA TCTTCATCTC TTCTTTCGTT CTCCACAAAC 
    ATATGACTGA TTTGTTTGTA ACAGAGAGGT GTATAATAAA TAGATCGTCC 
    CGGTCCCACA TAATCTTACA AACTTACCGT TTAGAATTGA TTATCACCGT 
    CCGATATCTC ACAGTTGCAA CCTGATGAAA CTAAACGGTC CAGATCTCTC 
    GAACGTTGTC AGATTTTCTT ATTTTTTGTC AACCCTAACA AGAAAAGGAA 
    ACAATCGAAA GTTTCCTTTT TTTTTGAANA AGCGAATGCT TATAAATGAA 
    GACCTCCAAA CATCACTCAT TCTCTCTTCT TCCTTGAGAA ATTTAAATCC 
    ATTATCATTC TCTCTTCTTC TTCGATACCA TAACAAAATA ATTCTTCATC 
    TTTCATTATC TCGTTTTGNC TAAACAGAAC GATCGTTTTA NACCGGATGC 
    TCTCGTCTTC TCAGCAAACA AACAATCATC GTAGGATTGA TCTCCATCCT 
    CTGTTGNGAC TCATCTTCAC TT

AT1G02490.1

Model type
Protein coding
Computational Description
unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02500.1

Model type
Protein coding
Short Description
S-adenosylmethionine synthetase 1
Curator Summary
encodes a S-adenosylmethionine synthetase. SAM1 is regulated by protein S-nitrosylation. The covalent binding of nitric oxide (NO) to the Cys114 residue inhibits the enzyme activity.
Computational Description
S-adenosylmethionine synthetase 1 (SAM1); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: response to cadmium ion, response to salt stress, ethylene biosynthetic process, S-adenosylmethionine biosynthetic process; LOCATED IN: cell wall, plasma membrane, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 2 (TAIR:AT4G01850.2); Has 10905 Blast hits to 10897 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4149 (source: NCBI BLink).
Link
InterPro Scan - TAIR