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Mutant Lines
11-5123-1

11-5123-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 1238903 [Map]; Strand: c
- AT1G04540.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
  Distance: 0; Region: exon1 (CDS)

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCC TGACCTCCAT CTGTGTGACG GCGGTTATGC 
TTTTTCGTCG TCGGAGTTTT CCGTCTTGAA CTCATTCCTC CCCCGGCAGT 
TGCAGCTGGA ACGCTCGCGC CATCGTAATC AGTGCTACTT ATATGGCTTG 
ATCCTATGTC GTACAACGGT GGAAGCTCTG TTCGCCATCT CTCGAGTTTT 
GATCGCAATC CTTCGATGCT AGATTCATCG ATGCTCCATT CGCTGAGTAT 
TGAACTTTCC GTTTCGTGCG ATCTATCTTT CGCCAATTTG TCAGCCACTT 
CAGATGGCGA TGGTCCTAAC TCCGATTCAG TTAAGATTCG TCTTCCAGCT 
AAATTCCTCA CTGGTGTACC AAAATCGTGA TGAGTTCTCA TCGGTGTAGC 
CATGTAGTTT GATCGGATCG GGGTTGATCC GACGATGTTT GATCTCATTG 
GAGTCGAACC AACCATGTTA GACCGCATAG GAGTTCGCAT TGGAGTCGAT 
CCAACCATGT TGGGATGCAT CGGTGACATT GCGATGATGT TGGATCTCAT 
AGGAGTTGAT CCAACTCCGT TAGATCTCAT CGGAGTANAT GCGATGATGT 
TTGATCTCAA TGGTGTTCCG TGCTTCGATA AGTACGGGGA AGCTCGGCCA 
CGATCGTAAG CTACCANCCC NGGGCCGNNN ACCACC

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 1238901 [Map]; Strand: c
  - AT1G04540.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 11-5123-1 - 3-prime edge
```
AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
AGGTAATGGA CTTTTCTCGT GTTTTAGTAA GATTTGTGGT GTGGAATGCA 
GTTTCGTATG CGGTGGTGGT GGCA
```

AT1G04540.1

Model type: Protein coding
Short Description: Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description: Calcium-dependent lipid-binding (CaLB domain) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G33320.1); Has 556 Blast hits to 454 proteins in 75 species: Archae - 0; Bacteria - 32; Metazoa - 92; Fungi - 46; Plants - 336; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).
Link: InterPro Scan - TAIR