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11-5125-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19673498 [Map]; Strand: w
      • AT2G48110.1 - [+] show detail - reduced epidermal fluorescence 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5125-1 - 3-prime edge
    ANTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CTGCCAGCAG ACGCGAGGGT CAAGCGAAGC TGAAGAGCCC AATGAAGCGG
    ATC

AT2G48110.1

Model type
Protein coding
Short Description
reduced epidermal fluorescence 4
Curator Summary
Encodes a novel protein of unknown function with homologs in non-seed plants. Sequence analysis predicts membrane spanning domains and a putative protein-protein interaction domain. Semi-dominant mutations display defects in phenylpropanoid accumulation suggesting a role in phenylpropanoid metabolism.
Computational Description
REDUCED EPIDERMAL FLUORESCENCE 4 (REF4); BEST Arabidopsis thaliana protein match is: REF4-related 1 (TAIR:AT3G23590.1); Has 140 Blast hits to 138 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR