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11-5155-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2871402 [Map]; Strand: c
      • AT1G08920.3 - [+] show detail - ERD (early response to dehydration) six-like 1
        Distance: 1172; Region: intergenic
      • AT1G08930.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -2063; Region: intergenic
    Flanking Genome Sequence: 11-5155-1 - 5-prime edge 
    AATATTTACA TATGAAAAGA AGCATAGACC AATCAACGAT TAGGACCGTC 
    CGACATTGTG TAGTCGATTA GCGATTTCTA GAATCACTTT CCAATTTTAA 
    AATAGAAGTA AATCGACGAA AGTAAGGAAA AAAAAAAAAA ANNAAAAACN 
    NNAANTNTTA NNNCNTTTCC CNNNNNANNT TTTNNNCCNT TTNNGNNAAN 
    NNAAAAACCC NANGGGGNTC CCCNAANNNN NNTTNNNNCC GNCCANNNNG 
    NNNCNAAAAA NTTTTNNTTC CCNANNNAAN TTAAAAAANN TTTTTTNGGG 
    NNNCCCNTGN NAAANTTTTN CCNAANGGNC AAAAATTNNA NNNTTTTNNC 
    CANNNAAAAA AAAAAANGGC NAAAANTTNG NAANTTNNAA AGGGGGGGNA 
    AANNANNAAN GGGGNGGTTT TTTTNNNNNN NNCNAAANAA NNAANAANGG 
    CCCNGNCCCC CCCCNAAATT NGGGGGGGCN NNNNANNNCT TNNTTNCNNT 
    NGGGGGNNAA ANTTNAAAAC CCNTTTTTNN AANCCTTNAA NGGAAAAAAA 
    GGGGNTTTTT TTTTTANNAN CCTTNAAAAN GGGAAAAAAA TAACCCNTTT 
    TTNTTTGGGG CCCCNTTTTT TNCNNGNTTT NAAAACCCNT TNNNCNNGGG 
    AAAATTTNAA AAAAAANNNG NTTTTNNNAA AGGGAAANTT TNCNAAAANN 
    NNTTNCCCTT TTGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2871518 [Map]; Strand: c
      • AT1G08920.3 - [+] show detail - ERD (early response to dehydration) six-like 1
        Distance: 1288; Region: intergenic
      • AT1G08930.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -1947; Region: intergenic
    Flanking Genome Sequence: 11-5155-1 - 3-prime edge 
    TAAATATTTC GTGGATGATA AAAATAAGGG ATTAAGTAAA AACCTTAACT 
    CCATTATTTT ATTTTTCTTA CATTCCACTA TGTTACTTAC GTTCCATTTT 
    TAGGAGAAGT TTGAAGAATA ACCCAAGTTA AATGCNGATT TCATACGAAC 
    TAACAAAACT AGTTCATTGA GATAAAATTC AATTGATGAT GAAAATCAAA 
    CTAAAAAAAA CGAAGCTAAG ACTAAAGCAT AAAAGAGGAT TTTTCAATGT 
    AAATATAATT ATTTTTGTTT GTAATTGTCT ACAATATGAA CTATACAAAT 
    TTTAATTAGA GTAAGTGAAA AATAAATAAA TTAGAGTAAA TGATACATCA 
    AGGATATTAA GTTATTAACA CGATGACAAA AAAAAAAAAA AANNTTTTTC 
    CCCNNNCCCN TGGNNGGGGN TTNNANGGGG GGNCCNNAAA NGGGGGGGGG 
    GGGNANNCCN NCNTTTTTTA AACCNNGGGN AAAAAANGGG GGNNCCCCCC 
    CCNTTTTTTT GGGGNANAAA AAANGGTTTN NTTTTNNNNN AANTTGGNGN 
    NAAANGGGNC AAAAAAAANT TNGGNCAANN NNTNNATTTT TTTGGGGGCN 
    GNGAAANNNT TTTNANTCCC NANAANCCCT TTNATATTTT NAAAAAAANN 
    TTTTTTTTTT TTTTTTTTTT TTTNNNNGGG GGNGANAAAA NTNNNNNNNN 
    NCCNNNNNNN NNCNCCAAAA ATNTNGG

AT1G08920.3

Model type
Protein coding
Short Description
ERD (early response to dehydration) six-like 1
Curator Summary
Encodes ESL1, a transporter for monosaccharides.
Computational Description
ERD (early response to dehydration) six-like 1 (ESL1); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08930.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Curator Summary
encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold.
Computational Description
EARLY RESPONSE TO DEHYDRATION 6 (ERD6); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sugar transmembrane transporter activity; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to chitin, response to abscisic acid stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: ERD (early response to dehydration) six-like 1 (TAIR:AT1G08920.1); Has 27777 Blast hits to 27182 proteins in 2058 species: Archae - 500; Bacteria - 11725; Metazoa - 4936; Fungi - 6599; Plants - 2746; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink).
Link
InterPro Scan - TAIR