1. Home
  2. Mutant Lines
  3. 11-5260-1

11-5260-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1245563 [Map]; Strand: c
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 11-5260-1 - 5-prime edge 
    GGGANAAAAC TAACAAAATC CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATCA AAAAGAAGTT AACAAAATAT CCAAACCAAG 
    TTTAGTCGTC AAAATTAGCA CTTCGTGAGA AGTAGCTAGT AGGACATCAT 
    AAATAGAATA ATTACCCCAT GGCAAGAGCT GTGATGGCCC ATGCAACGAT 
    GGAAGAAGCT CCGGCAGCGG CTAAACTATC ATTCCTCCAA AACCTAATAT 
    GATTTGCTCC GGCCAACTTC GACGCTACTC CTACCACAGC CGCCAATATC 
    GAAAACGTCA AGAAGAACGG TGTTGCTCCA TTGCCTCCAA AACCTATTCA 
    AACATTACTA ATTAATATTC TTAGTAATTC CATTAAATCA GCTACATGAT 
    CATATATATA GCTATAGAGA TAAGAGAAAA AGAAATTTAC TTGGGTGGTT 
    AGTTTGGCCG TTGATGTATT TATTGAGACA CCAACTTGCG AAACCAAGCA 
    CAATCAGGTA CATAACAAGA TTCAAGAACA GCAATGGTGC TGCTATGTTT 
    CTTCCCACTG TCGTCGCCAT CAATTTCTTC TTTTACCTTC TCCTAAAGAT 
    C

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7263043 [Map]; Strand: w
      • AT3G20770.1 - [+] show detail - Ethylene insensitive 3 family protein
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 11-5260-1 - 3-prime edge 
    GAAGTAAGAA CAAACCGAAT TTTTTAGGGT TATTATTGAT ACTGAAGATG 
    ATGATAGGTT TATTCATAGG GTTTTACTAG ATCGATGGTT TTACTTTAGT 
    TTACTAGTGT TTACACGATC TAATTTCATG AGTTTATGCT ACNTTTTAGT 
    TTTTTTTTNG GTNGAATTTT NGTTNATNGT TNATAAATCG TNGATCTATT 
    NGAAAANGTT TNCTCTTTCT TATTCATATA TNANCCTTTC TATNTTNGGT 
    NCCTATGTTG AAAATN

AT1G04560.1

Model type
Protein coding
Short Description
AWPM-19-like family protein
Computational Description
AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G20770.1

Model type
Protein coding
Short Description
Ethylene insensitive 3 family protein
Curator Summary
Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.
Computational Description
ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink).
Link
InterPro Scan - TAIR