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11-5294-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19588130 [Map]; Strand: w
      • AT2G47820.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon2 (CDS)
      • AT2G47820.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-5294-1 - 3-prime edge 
    TTNNNNGNNC CTNAAGCGGN CGNAGGTATT TTANNGACCG TTACCGACCG 
    TTTTCATCCA TGTGAGTAAG TCACCACCAA TAAATCTAGA GCATTGGAAA 
    AAAGGGAAGC T

AT2G47820.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09040.1); Has 628 Blast hits to 543 proteins in 149 species: Archae - 0; Bacteria - 106; Metazoa - 145; Fungi - 69; Plants - 97; Viruses - 10; Other Eukaryotes - 201 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47820.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09040.1).
Link
InterPro Scan - TAIR