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11-5312-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2170103 [Map]; Strand: c
      • AT1G07080.1 - [+] show detail - Thioredoxin superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5312-1 - 5-prime edge 
    ACGAAGATGG AAGAGATACC CCAGAATAAT CAGATGATGA TGCAAAGGGG 
    AAAAGAAAAA CGTAGCAGAC TAGGACTGGA AGAAGTTTGC TCGGCATCGA 
    CGCCATGGAT GCAAATGCAA GGTTTTTGTG TCGTCGCATT CTTCTTCTTC 
    AAAGAACATT CAATAAATAT GAAAGAGCCG AGAGAAATTA GATAATTGCT 
    ATTCCCAATG GTACCAATTT ATTACAGACA CGTGTAGCTT CGAAAGCCAC 
    GTGTCTCACT TTCATTCTGT AACCGTCAAT AGTTCAACAC AAAGTAAGCT 
    CAGGCTTTGC AAAATTTGGG TAAACTTGTG AACTCGACTT ATCAAAAAGG 
    CTCATTTTAA CCAAAATTGT TAACTCCAAA AAAGGTTCAG GATAAAGAGT 
    CAAATAATAA ACAAGGTCCA TAAACAAAGG CTTGCAGATA ATAAACCACT 
    TGATGACGAG TACACACTGC TTTAAATGTT ACTCGGATAC ATAAACACTC 
    GAACTCGAGA TCCCTGCAAA AAAACAATCA ACCAACTGTA TTAGAAGAGC 
    TAGGAAAGAG ATAACAACAA TTTCAAACAT ATATAACTGA AATGATTTGG 
    ATTACCATTG ATTTAGGAGG CAAGTTTGAT GTGAATTTGG CTCGAACAAC 
    GCCACTGTTA CCGTGAGGCC TTGTGACTTT GCCCCAAATG CATCGGTAGT 
    GACTACCGTT CTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2170178 [Map]; Strand: c
      • AT1G07080.1 - [+] show detail - Thioredoxin superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5312-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GCCTAAAGTC TCGGTGGGCC TGTACTACGA GTCTCTCTGT CCCTACTGCT 
    CTTCCTTCAT TGTTAACCAC CTCGCGAAGC TCTTCGAAGA CGATCTCATA 
    TCAATCGTCG ATCTCCATCT CTCTCCGTGG GGCAATACCA AGCTCCGTTC 
    CGATAACGGT CACTGCCGTT TGCCAGGTAC TCCTTCGTTT TCTTCAATTT 
    ACGAATT

AT1G07080.1

Model type
Protein coding
Short Description
Thioredoxin superfamily protein
Computational Description
Thioredoxin superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma interferon inducible lysosomal thiol reductase GILT (InterPro:IPR004911), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: gamma interferon responsive lysosomal thiol (GILT) reductase family protein (TAIR:AT5G01580.1); Has 470 Blast hits to 463 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 320; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Link
InterPro Scan - TAIR