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11-5369-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9686347 [Map]; Strand: c
      • AT2G22770.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 11-5369-1 - 5-prime edge 
    CTCATTATTC AACTAAACCG AGTGATCTGG TCAAAATTGG AGACCAAATC 
    TAACACGTTT AACCACTGCG AAATTCACAT AAACGTTTTT TAAAATATTA 
    TTCAGCTAAC GCAACTCTTA TGTTCTTCAC CACTTCTTCA ACTGGTCGAG 
    AAAATTTGTT GTCCATCTGC AAATTAGATT TAAAAATCAC ATTAATACAT 
    AAAAATCAAC AGTAAATGAT AATATATAAA AAAAAGATAG AATATGATAA 
    ATAAAAAAAT ATTAGAAGAT TGATAACATA CCTTAGTGAG AATGGTTATA 
    ACGAGAGTTG AATTTCCAAA TGGTAAAGTG AAGCTATTGA CTACTTCAAG 
    ACGAAACTTC TCCAAGGAAC TTAAGATCTT AATCATACAC CCTTTGTTCT 
    TCTCACAATG GACTCTAATC AACAAATCTC TGTCTGAAAC TCGGGCTTCN 
    ATCATAGGCA TTGTTTGTTT GAAGATTGAA ACTTCGTCCG AAGAAGAAGA 
    CAGAGGAGAC GCAGCAGAGC AAGTAGAAGA ATAAGATGAA GAATCATCAT 
    CTAAATACAC TTGAGATCTC TTCACCAATA TAATNGATTG ATCCATTTTC 
    TTGGTCACCA CTCGCTCCTC CTCCAGCTNC TTTACCCGNT CTTGAAGTTG 
    NTTCAAATGT TTGATGGCAT CTCAANAACT GTNGCCTTG

AT2G22770.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Curator Summary
regulates the development of ER bodies. also involves in response to the endophytic fungus Piriformospora indica.
Computational Description
NAI1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22760.1); Has 3457 Blast hits to 3451 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 69; Plants - 3252; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR