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11-5386-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26736506 [Map]; Strand: w
      • AT1G70920.1 - [+] show detail - homeobox-leucine zipper protein 18
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 11-5386-1 - 5-prime edge
    GAAAGAACAA TCACATCTTC TTGAAGAGAG TTTCATACAA AACCATACCT 
    TAACCCCTGT AAGTATATAT TAATGGCTCC GTCTATGTTT TGCTTACGTT
    GAATAGAGAA ATAAGAAAGA GAAAAGAGTT AATCTTTTCT GATGATCATG
    TCGGCTGATG ATGTTTTGGG TGGCTGATTA TGAAACCACA GAAGCAAAAA
    AAAGATTTGG CCACCTTTTT GAAGCT

AT1G70920.1

Model type
Protein coding
Short Description
homeobox-leucine zipper protein 18
Computational Description
homeobox-leucine zipper protein 18 (HB18); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 17 (TAIR:AT2G01430.1); Has 12733 Blast hits to 12688 proteins in 617 species: Archae - 0; Bacteria - 0; Metazoa - 10651; Fungi - 202; Plants - 1634; Viruses - 5; Other Eukaryotes - 241 (source: NCBI BLink).
Link
InterPro Scan - TAIR