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Mutant Lines
11-5388-1

11-5388-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 22271739 [Map]; Strand: w
- AT5G54820.1 - [+] show detail - F-box/RNI-like superfamily protein
  Distance: 0; Region: exon3 (CDS)

GTCTCTTGAA AAGGTCATTT TTTCAAGAGT TGTGCACAAA GAACTTGTAC 
ATGCTTCGAA GTTCTCTGTA ACATTTCCGC TTTAGCAAAT ACCACCATCG 
CTTGACTTTC TTCCATCCCA TTCGGCACGT AAAGCTCTAC TCTTTCCAAC 
GCATCTCCAG CACCGCTCGC TGATCGAATC AAATACCTCA ATACATTTAG 
CTCGTTTGAG GAACCACAAA AGTTCCTAAT AACCACGACC TTCAGTGTCT 
TCCTTAGACT CTTACATGTT CTCTTCTGCA TCCAATACGT TTTAGGATCG 
ATGCCTTCAT CTGACGAAGT TGCCTACAAA ATATTAAAAG AAAATCATGC 
ATATTAAGTA ATGACAAAAT GTGACTACTC TTTATTGCAT ATATATGTAG 
AAATCTTACC GAGAAAGGAC ATGGAGTTAG AATATCAAAA CCAAGCGTCT 
CCAAATTAGG GCAGTTGTTG AGAAGAAGAA TTATTCCATT GAACTCCTTG 
GTATGCATCT TAGTTCTTAG CACCAAGTGT CGTGTTTCCA TAGGTTGAAG 
CAAATCANAT GGCTTTTCAC ATTCTGGGAT AACCTTCCAT AAGAAAAGAA 
ACACATGTCA ATATCAAAAA TACATTATAA CGGATTAACN GGTTATATAT 
ACAACAAATT AACGTANTAN CTGTTATGAA TTTAATNTAG TAAAACTAAC 
CTTTNAAGAT N

5 prime edge [+] show sequence

Chromosome: 5; Position: 22271861 [Map]; Strand: w
- AT5G54820.1 - [+] show detail - F-box/RNI-like superfamily protein
  Distance: 84; Region: intergenic
- AT5G54830.1 - [+] show detail - DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal doma...
  Distance: -1209; Region: intergenic

ATTGCTCCTA GTGGGTTTTG TTTGCCCATT TAGCTATGGT TTTTGAATTT 
TTATCTATTG ACATTAAGGA AGCATGCTTT CGTACTTTGG TTTGTTTGAT 
TTATGTTCAA GAACCTCGGA GAGTTGAGGA CTTTATTTAT GTGAACCAGA 
AATAATAATA AATGTTTTTG ATTAATATCA ATTTGATAAT AATTATATTA 
TAAAATTTAA TCTCGATTTT TTAAAATTAC GGGATTAAAT TTTAACTAAA 
TGGTTATGGA AATCTCTGGT TTTGCAGTCT TGTCTGATGC ATTTGTTACT 
CGATAACAAC ATTGATCTGA CGGTGGAAGG TACATCTCAA AACGGTGAAG 
TTATCTTTGC ATATAAACCA TTCCTTCACC GCCCTTTTTA CATTTTCTAT 
TATGATCTGC AAAATAACGA TTTGAGAAAG GTTAGAATCG AGGAATATTA 
CCATTATATT TGTTTGGTAA GCATTACATC AACATGACAT TTTATTTCAA 
GCATATGGAT AAAAGTGAAA GCATCATGTA CTTGGAAATT TGAAAGCCNT 
NGCTTTCAAC CTAAGATGAT CATTATGTAA TTGCTTTTNG CCCTTCAATA 
GNACAATGCT ACTATTNNAT TNNGNAATCN ATNCTATCAT GTANGGNNGN 
AAATCNAATN CANGANAAAG NCTTTGGCAA AAAAATNNGT NAAT

AT5G54820.1

Model type: Protein coding
Short Description: F-box/RNI-like superfamily protein
Computational Description: F-box/RNI-like superfamily protein; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G56400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G54830.1

Model type: Protein coding
Short Description: DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein
Computational Description: DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein; FUNCTIONS IN: dopamine beta-monooxygenase activity, monooxygenase activity; INVOLVED IN: histidine catabolic process, metabolic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Electron transfer DM13 (InterPro:IPR019545), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G61750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR