Home
Mutant Lines
11-5408-1

11-5408-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 3158805 [Map]; Strand: c
- AT1G09750.1 - [+] show detail - Eukaryotic aspartyl protease family protein
  Distance: 0; Region: exon2 (CDS)

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCG CTGCTGTGGA TAAGTGTATT CTCCATCGGC 
AGCTTCAAGT CGAGTGACGT CATGTGCAGC GTTATCTTTG GCGCCACATT 
CTCGTTATCC GCCGAGAAAC ACGTGTCAAA CGCTCCCAAT GTTGAGAATG 
ACGACACATT CACCTTCATT AAACAAGATT GTAATTAGTT TCCCATTTCT 
TGAGTTATAC TAATTGTGAT ATTAACGAAA TTACCTGCTT CCTAAACTCG 
TCTCTAATGG CTTCGTACAC GGGTTGAGCA AAACGGGTGA TAACAGTACC 
GGAATCGATG ATCGTACCGG CGCCGGAATT TGCGTCAAAC GTCAAATACA 
CTGGGTCAAC GGGTACCTGG ACGGAACCGA CACTCACTCC GGTGAGATTC 
ACATAGTAAA GTGATGGACG GCGAGGGTTA CGGAGGAGTG GAGTGTATCT 
GATGGATTTG GGTTGACCCA AGAGACCCAG TTTCAACGAC CCGGAGAAGT 
AGAAGGACCT GAAGCTAGGG AGGCAGTATG AGAACACTCC TGAGTAAAGC 
GACGTAGTTT GAGAGACCAA TGACATAGGC CCGCGTCCTA GGCCCATTAG 
TCCTTGCGGT GGTAGAGAAT TGCCTGAGGC GGAGTTGATG CACCGAAGGA 
GAAATTTGGG ATGACGTCAN GGGCTAACGT TANCGNGTCT TGGACGANAC 
TGGCANANAA

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 3158829 [Map]; Strand: c
  - AT1G09750.1 - [+] show detail - Eukaryotic aspartyl protease family protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 11-5408-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGAACG CTGACGTGTC 
TATCCATGGC CGGGATACGG CAGAACGCAA ACGCTGTTCT AAACGTGATC
```

AT1G09750.1

Model type: Protein coding
Short Description: Eukaryotic aspartyl protease family protein
Computational Description: Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 2762 Blast hits to 2753 proteins in 256 species: Archae - 0; Bacteria - 2; Metazoa - 415; Fungi - 350; Plants - 1861; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink).
Link: InterPro Scan - TAIR