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11-5433-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2975555 [Map]; Strand: c
      • AT2G07170.1 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: exon2 (5UTR)
    Flanking Genome Sequence: 11-5433-1 - 5-prime edge 
    TGTGTATTAG TATTAGCCTT CATGTTTCCT CCTCTTCCTT TTACTTGCAT 
    GTTCGTCTTC ATAATCCTTC CTCAAATCCA ATAACTGCAA CAAGGAATTA 
    GAATTGAGTC TGAGACATGT AGCCTCAAGG ATCTGGTGAA TCGAAGAAGC 
    AAATTCAAAT CTCTCCCTAA TTCGCTCTAT AATTGGAAAG AAGAAGATGA 
    TAATAACCAA AAAACAACAG CGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2975671 [Map]; Strand: c
      • AT2G07170.1 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-5433-1 - 3-prime edge 
    AATACACAAC AAGTGATTTT TGAGCTGAAG AAGAAGGTTG TTATTGCATT 
    AAACAAGTTA GCAGATAGAG ATACATATCA GAGAGGAGTT GATGAGCTTG 
    AGAAAACTGT TGAGCATTTG GCACCGGATA AGGTTTCATG TTTTCTCTCT 
    TGTATTTTGG ATACTGATTC TGAGCAGAAG AGTGCTGTGA GGAAAGAGTG 
    TATTAGGTTG ATGGGGACTT TAGCTAGGTT TCATGAGGGA CTTGTTGGTC 
    CATATCTTGG TAAGATGGTT TCTAGTATTG TTAAGCGGCT TAAGGATC

AT2G07170.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G27210.1); Has 437 Blast hits to 391 proteins in 95 species: Archae - 6; Bacteria - 71; Metazoa - 26; Fungi - 88; Plants - 186; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).
Link
InterPro Scan - TAIR