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11-5458-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11111621 [Map]; Strand: w
      • AT4G20720.1 - [+] show detail - dentin sialophosphoprotein-related
        Distance: 3568; Region: intergenic
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 142; Region: intergenic
    Flanking Genome Sequence: 11-5458-1 - 3-prime edge 
    TTTAAATTGA TCTGTAGATC GTCTCCTGAG TCTCTCTAGA TCACTGGGAA 
    ATTGAGCCTG AGTTCGGCTG GTCGGATAGA CGAATCTGCG CTTGAAAGAA 
    ACGCCAATAT CGCTTGGAAG ATTGCTTCGA TTGGATCTAG GTTAGATTCG 
    TTGGAAAGAT AAAGCTCAGG GCTTCAAATC GACACGTAGA TTGACTCCTC 
    TCTCTTTAAC TCGCCGGGAA ACTCTCTTCC AAGTCAACCG TTTTGACAAC 
    TGAATCTCTG ACCTAGAGGC TTATCAGTAG AAAATCAGCG ATATTCATCG 
    AAAGAATT

AT4G20720.1

Model type
Protein coding
Short Description
dentin sialophosphoprotein-related
Computational Description
dentin sialophosphoprotein-related; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT1G05090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G20725.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.2e-31 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR