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11-5513-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 260814 [Map]; Strand: c
      • AT4G00620.1 - [+] show detail - Amino acid dehydrogenase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-5513-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTN 
    TTACTCTGCT CGNCNNGGCT GAGNTNAAAA GGAAGAAGGT AACTGGTGGA 
    NACAGGAANA CTAATGAAGT CTGCTTAATT TGTGATCTAG AGCAAAGCAG 
    CANCNCGAGA AGAGACNATC GAATTGAAGA AGATAACTTC GTCGNCTACC 
    CGAGAGTCGG AGAGACTAGG GTTTCTTCTT NNGATNTCAA CNAGGGTTTA 
    AATTCATNCN AATCNCANAN GAAACCGGTT TGGTGATTNC ACCTGAATTT 
    NCCGGTTTTA TNATACCNGT CTTTCGTTNT CTTTTCTTTT TTAATANATC 
    CAATCNGACC GCTTCATANN TTTAGTACCG NNTTTAATTN GATTANTNGT 
    CTTNAACTCA CATNAATCNT NTNATTAACN CTGNTCANTA TATAAACAAT 
    ACATGTANGT TCNTTGACTT ACGGGCCATT CTCTATTTGT GGTCTAAAGT 
    ACCACACTAG ATATATATAC CCTTGTGATT AANCCTCTAG AGCTCNANCN 
    ATCAAAGCTA ANTGTGTTAC AAGTGGTATC ANAGCAANTN NTGTAATTGG 
    NGATNNCCAA NATGGTTGAA NGGTGAANCA AAGGTNNAAN GTACNNACCA 
    TTAGTGNCGG NTTANTATGA NATTGNGGGA TGCANTNACG TTNTTAACCC 
    CATGTCGAAN ANNGATTTGA TTTGCCTTCG NTTTTCCCCC AAACGAACNA 
    GCTAGAAANN TTTGNNCNCN TCANCGTCCC N

AT4G00620.1

Model type
Protein coding
Short Description
Amino acid dehydrogenase family protein
Computational Description
Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR