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Mutant Lines
11-5534-1

11-5534-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 844702 [Map]; Strand: c
  - AT1G03400.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Distance: -512; Region: promoter
  - AT1G03410.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Distance: 0; Region: exon3 (3UTR)
Flanking Genome Sequence: 11-5534-1 - 5-prime edge
```
GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCAA AAGGCATAAG GATATTTGTA ACATTCAAAT 
AAGGTACACA ATGAAAACTA CTACTACTTA CTTACTTCAT CTTCCAGCCG 
TGATGTAATA AAATTTGCGA GGAACCTTTC TTGTTTTAAG TCCTCGTGTT 
ACCATTTTCA TCTACGAACT TTGGGGATTA GATTCCCCCT CTTTTGAACC 
TTGTTTTATG TTGTATCACG AAAAAAGCT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 844700 [Map]; Strand: c
- AT1G03400.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
  Distance: -510; Region: promoter
- AT1G03410.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
  Distance: 0; Region: exon3 (3UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
CTGCTTTTGA GAAAGAAAAA AGAAGCTGGT TTCACGAAAG TTACTTTGAG 
ATGAAGACCG AGCAGAGCCA CCAATATAAT TGCTTCAGAT CCTGAAATGG 
TGTAACGCAG GGTGACTGAT CGTTTGGGAC CTGAAGGTGT TTGAAAACTC 
GGTGATGGTT AAGTCTCTAT ACTTGGCAGG GTTTTGTTCT GACAAAAGTT 
CTTTGATGGG TCCATATATT CGTGGATTCG GCTTCATGAA CGTGCTGACG 
AAACATGGCA TTGAAATCCG CGGTTCAGAA GATCCATTTG CTATCACCCT 
ATGCTCCGCG CTAATGAATT TGTCATTGCT TATAAGCTGC ACACAATAAA 
ACAGAGGGTT AAACCCACTC CATAGATGAA ATGAAGCTAG AAGCGCAACA 
ATATTTTCTT TTTAACCTGG AGAAGATCTC CGATGTTAAT GACAAGGGCG 
CCAGGGACAG GAGAAACATC AACCCAGCAT TGGTCATGGA TAACTTGAAG 
CCCTCCGATA TTGTCCTGAA GAAGAATGGT GATAAACGAG AAATCGGTGT 
GCTTGCTTAT GCCTAAAGTA AGGTCAGGCT GAGGGCAAGG TGGATAGTAT 
TGGCCAAACA TGATATGAGA CTTGGCACAG CCCATGTCCT TGAGGTGATT 
AGGGTTTAAT CCCAAAGCCT CAGATAGAAG CTCAAAGAGA AATTCACCTA 
AAGTCATTAG TTGCTTTGAG TN

AT1G03400.1

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator Summary: A single copy gene that encodes a protein with sequence similarity to tomato E8 (ACC oxidase, the last step in ethylene biosynthesis) involved in ethylene synthesis and fruit ripening in tomato. This gene is not induced by ethylene in siliques. The transcript is found in siliques, etiolated seedlings, leaves, stems and flowers.
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G03410.1); Has 8186 Blast hits to 8162 proteins in 1002 species: Archae - 0; Bacteria - 1123; Metazoa - 116; Fungi - 839; Plants - 4847; Viruses - 0; Other Eukaryotes - 1261 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G03410.1

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description: 2A6; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G03400.1); Has 8330 Blast hits to 8293 proteins in 997 species: Archae - 0; Bacteria - 1128; Metazoa - 114; Fungi - 883; Plants - 4883; Viruses - 0; Other Eukaryotes - 1322 (source: NCBI BLink).
Link: InterPro Scan - TAIR